PXD010200

PXD010200 is an original dataset announced via ProteomeXchange.

Title	Environment-driven changes of mRNA and protein levels in Pseudomonas aeruginosa
Description	LFQ proteome datasets of Pseudomonas aeruginosa type strain PA14 cultured at different enviromental conditions: Exponential-, transition- and stationary(12 h and 24 h)growth phases. Biofilm (24 h and 48 h), low osmolarity conditions (control = exponential phase), iron starvation and respective control, Sub-MIC ciproflox treatment and respective control.
HostingRepository	PRIDE
AnnounceDate	2018-11-20
AnnouncementXML	Submission_2018-11-20_02:11:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jelena Erdmann
SpeciesList	scientific name: Pseudomonas aeruginosa (strain UCBPP-PA14); NCBI TaxID: 208963;
ModificationList	S-carboxamidoethyl-L-cysteine; monohydroxylated residue; deamidated residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2018-06-22 07:59:46	ID requested
⏵ 1	2018-11-20 02:11:34	announced

Erdmann J, Preusse M, Khaledi A, Pich A, H, ä, ussler S, Environment-driven changes of mRNA and protein levels in Pseudomonas aeruginosa. Environ Microbiol, 20(11):3952-3963(2018) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: Label-free quantification of proteins, mass spectrometry, post-transcriptional regulation, random forest prediction, proteome, transcriptome

Andreas Pich
contact affiliation	Research Core Unit Proteomics and Institute of Toxicology, Hannover Medical School, Hannover, Germany
contact email	Pich.Andreas@mh-hannover.de
lab head
Jelena Erdmann
contact affiliation	Medical School Hannover - ZFA Proteomics & Twincore, Molecular Bacteriology
contact email	erdmann.jelena@mh-hannover.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD010200

PRIDE project URI

• PRIDE
  1. PXD010200
     1. Label: PRIDE project
     2. Name: Environment-driven changes of mRNA and protein levels in Pseudomonas aeruginosa