PXD010117 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Dissecting the malaria interactome |
Description | To identify malaria protein interactions systematically we combined blue native polyacrylamide electrophoresis fractionation with quantitative mass spectrometry and machine learning. Our integrative approach identified over twenty thousand protein interactions in Plasmodium schizonts, organized into 600 complexes, the majority of which are novel, and generated a high-confidence Plasmodium protein interaction network. |
HostingRepository | PRIDE |
AnnounceDate | 2019-08-06 |
AnnouncementXML | Submission_2019-08-12_01:35:30.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | James Wright |
SpeciesList | scientific name: Plasmodium berghei; NCBI TaxID: 5821; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-06-13 08:18:22 | ID requested | |
1 | 2019-08-06 03:31:36 | announced | |
⏵ 2 | 2019-08-12 01:35:31 | announced | Updated publication reference for PubMed record(s): 31390575. |
Publication List
Hillier C, Pardo M, Yu L, Bushell E, Sanderson T, Metcalf T, Herd C, Anar B, Rayner JC, Billker O, Choudhary JS, Landscape of the Plasmodium Interactome Reveals Both Conserved and Species-Specific Functionality. Cell Rep, 28(6):1635-1647.e5(2019) [pubmed] |
Keyword List
curator keyword: Biological, Biomedical |
submitter keyword: Malaria, Berghei, |
Contact List
Jyoti Choudhary |
contact affiliation | Wellcome Trust Sanger Institute |
contact email | jc4@sanger.ac.uk |
lab head | |
James Wright |
contact affiliation | Functional Proteomics, Institute Cancer Research & Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute |
contact email | jw13@sanger.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD010117 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010117
- Label: PRIDE project
- Name: Dissecting the malaria interactome