PXD009998

PXD009998 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comparative proteomic analysis between light and dark-adapted Euglena gracilis
Description	We sequenced and assembled a detailed transcriptome and draft genome for E. gracilis Z1. To improve annotation and investigate gene expression in E. gracilis, where most transcripts are also trans-spliced, we conducted comparative proteomic and transcriptomic analysis between light and dark-adapted E. gracilis. The analysis revealed that alterations to protein abundance are controlled post-transcriptionally, surprisingly similar to trypanosomatids.
HostingRepository	PRIDE
AnnounceDate	2019-01-14
AnnouncementXML	Submission_2019-01-14_01:17:20.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Martin Zoltner
SpeciesList	scientific name: Euglena gracilis; NCBI TaxID: 3039;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-06-01 02:03:47	ID requested
⏵ 1	2019-01-14 01:17:21	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

curator keyword: Biological
submitter keyword: Euglena gracilis, light dark Adaption, photosynthesis, plastid

curator keyword: Biological

submitter keyword: Euglena gracilis, light dark Adaption, photosynthesis, plastid

Contact List

Mark C. Field
contact affiliation	Professor of Cell Biology & Parasitology Wellcome Centre for Anti-Infectives Research Division of Biological Chemistry & Drug Discovery School of Life Sciences University of Dundee Dundee DD1 5EH United Kingdom
contact email	mfield@mac.com
lab head
Martin Zoltner
contact affiliation	Division of Biological Chemistry & Drug Discovery School of Life Sciences University of Dundee Dundee DD1 5EH
contact email	m.zoltner@dundee.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD009998
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD009998

PRIDE project URI

Repository Record List

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