PXD009891

PXD009891 is an original dataset announced via ProteomeXchange.

Title	Profiling the proteomic inflammatory state of human astrocytes using DIA mass spectrometry
Description	In the present study we used DIA MS to characterize the profile of over 4,000 proteins in immortalized human astrocytes exposed to TNF, IL-1β, and LPS, as well as in primary human astrocytes cocultured with brain endothelial cells and exposed to LPS. For both immortalized and primary astrocytes, DIA MS data were matched against a spectral library generated by merging DDA MS runs from both unfractionated and fractionated cell lysates.
HostingRepository	PRIDE
AnnounceDate	2018-12-10
AnnouncementXML	Submission_2018-12-10_03:22:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vito Dozio
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-25 01:25:36	ID requested
⏵ 1	2018-12-10 03:22:53	announced

Dozio V, Sanchez JC, Profiling the proteomic inflammatory state of human astrocytes using DIA mass spectrometry. J Neuroinflammation, 15(1):331(2018) [pubmed]

curator keyword: Technical

submitter keyword: DIA MS human astrocytes inflammation

Jean-Charles Sanchez
contact affiliation	Department of Internal Medicine Specialties, Faculty of Medicine, University of Geneva
contact email	Jean-Charles.Sanchez@unige.ch
lab head
Vito Dozio
contact affiliation	University of Geneva
contact email	vito.dozio@unige.ch
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/12/PXD009891

PRIDE project URI

• PRIDE
  1. PXD009891
     1. Label: PRIDE project
     2. Name: Profiling the proteomic inflammatory state of human astrocytes using DIA mass spectrometry