PXD009773

PXD009773 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Soil Metaproteomics LC-MS .
Description	Sensitive models of climate change impacts would require a better integration of multi-omics approaches that connect the abundance and activity of microbial populations. Here, we show that climate is a fundamental driver of the protein abundance of microbial populations (metaproteomics), yet not their genomic abundance (16S rRNA gene amplicon sequencing), supporting the hypothesis that metabolic activity may be more closely linked to climate than community composition.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_10:13:36.601.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nico Jehmlich
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-14 04:01:26	ID requested
⏵ 1	2024-10-07 10:13:37	announced

Publication List

10.1016/j.scitotenv.2018.05.288;
Bastida F, Crowther TW, Prieto I, Routh D, Garc, í, a C, Jehmlich N, Climate shapes the protein abundance of dominant soil bacteria. Sci Total Environ, 640-641():18-21(2018) [pubmed]

10.1016/j.scitotenv.2018.05.288;

Bastida F, Crowther TW, Prieto I, Routh D, Garc, í, a C, Jehmlich N, Climate shapes the protein abundance of dominant soil bacteria. Sci Total Environ, 640-641():18-21(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Shotgun, LC-MS, Metaproteomics, Climate Change,Soil

curator keyword: Biological

submitter keyword: Shotgun, LC-MS, Metaproteomics, Climate Change,Soil

Contact List

Nico Jehmlich
contact affiliation	Dr. Nico Jehmlich Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 \| 04318 Leipzig Telefon +49 341 235 4767 \| Fax +49 341 235 450823 E-Mail: nico.jehmlich@ufz.de \| http://www.ufz.de Webseite: http://www.ufz.de/index.php?de=40882
contact email	nico.jehmlich@ufz.de
lab head
Nico Jehmlich
contact affiliation	Helmholtz-Centre for Environmental Research - UFZ
contact email	nico.jehmlich@ufz.de
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD009773
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD009773

PRIDE project URI

Repository Record List

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