PXD009773 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Soil Metaproteomics LC-MS . |
Description | Sensitive models of climate change impacts would require a better integration of multi-omics approaches that connect the abundance and activity of microbial populations. Here, we show that climate is a fundamental driver of the protein abundance of microbial populations (metaproteomics), yet not their genomic abundance (16S rRNA gene amplicon sequencing), supporting the hypothesis that metabolic activity may be more closely linked to climate than community composition. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-07 |
AnnouncementXML | Submission_2024-10-07_10:13:36.601.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Nico Jehmlich |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-05-14 04:01:26 | ID requested | |
⏵ 1 | 2024-10-07 10:13:37 | announced | |
Publication List
10.1016/j.scitotenv.2018.05.288; |
Bastida F, Crowther TW, Prieto I, Routh D, Garc, í, a C, Jehmlich N, Climate shapes the protein abundance of dominant soil bacteria. Sci Total Environ, 640-641():18-21(2018) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Shotgun, LC-MS, Metaproteomics, Climate Change,Soil |
Contact List
Nico Jehmlich |
contact affiliation | Dr. Nico Jehmlich Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 | 04318 Leipzig Telefon +49 341 235 4767 | Fax +49 341 235 450823 E-Mail: nico.jehmlich@ufz.de | http://www.ufz.de Webseite: http://www.ufz.de/index.php?de=40882 |
contact email | nico.jehmlich@ufz.de |
lab head | |
Nico Jehmlich |
contact affiliation | Helmholtz-Centre for Environmental Research - UFZ |
contact email | nico.jehmlich@ufz.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD009773 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009773
- Label: PRIDE project
- Name: Soil Metaproteomics LC-MS