⮝ Full datasets listing

PXD009773

PXD009773 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSoil Metaproteomics LC-MS .
DescriptionSensitive models of climate change impacts would require a better integration of multi-omics approaches that connect the abundance and activity of microbial populations. Here, we show that climate is a fundamental driver of the protein abundance of microbial populations (metaproteomics), yet not their genomic abundance (16S rRNA gene amplicon sequencing), supporting the hypothesis that metabolic activity may be more closely linked to climate than community composition.
HostingRepositoryPRIDE
AnnounceDate2024-10-07
AnnouncementXMLSubmission_2024-10-07_10:13:36.601.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterNico Jehmlich
SpeciesList scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-05-14 04:01:26ID requested
12024-10-07 10:13:37announced
Publication List
10.1016/j.scitotenv.2018.05.288;
Bastida F, Crowther TW, Prieto I, Routh D, Garc, í, a C, Jehmlich N, Climate shapes the protein abundance of dominant soil bacteria. Sci Total Environ, 640-641():18-21(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: Shotgun, LC-MS, Metaproteomics, Climate Change,Soil
Contact List
Nico Jehmlich
contact affiliationDr. Nico Jehmlich Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 | 04318 Leipzig Telefon +49 341 235 4767 | Fax +49 341 235 450823 E-Mail: nico.jehmlich@ufz.de | http://www.ufz.de Webseite: http://www.ufz.de/index.php?de=40882
contact emailnico.jehmlich@ufz.de
lab head
Nico Jehmlich
contact affiliationHelmholtz-Centre for Environmental Research - UFZ
contact emailnico.jehmlich@ufz.de
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD009773
PRIDE project URI
Repository Record List
[ + ]