PXD009757

PXD009757 is an original dataset announced via ProteomeXchange.

Title	Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.)
Description	Fig fruit are highly perishable at the tree-ripe (TR) stage. Commercial-ripe (CR) fruit, which are harvested before the TR stage for their postharvest transportability and shelf-life advantage, are inferior to TR fruit in size, color and sugar content. The succulent urn-shaped receptacle serves as the protective structure and edible part of the fruit, and determines fruit quality. Quantitative iTRAQ reveal the proteins and transcripts that are differentially expressed in fig receptacle at the two harvest stages. We annotated 691 proteins against uni_Moraceae_3487, of which 59 showed ≤1.3 -fold change—in TR vs CR fruit. Ficin was the most abundant soluble protein in the fig receptacle. A high abundance of aminocyclopropane-1-carboxylate oxidase was identified.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:45:24.351.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yuanyuan Cui
SpeciesList	scientific name: Ficus carica; NCBI TaxID: 3494;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-11 05:40:10	ID requested
1	2019-03-22 05:11:24	announced
2	2019-03-23 01:30:21	announced	Updated project metadata.
3	2019-04-23 02:42:53	announced	Updated project metadata.
⏵ 4	2024-10-22 04:45:25	announced	2024-10-22: Updated project metadata.

Cui Y, Wang Z, Chen S, Vainstein A, Ma H, Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.). BMC Plant Biol, 19(1):146(2019) [pubmed]

10.1186/s12870-019-1742-x;

curator keyword: Biological

submitter keyword: tree ripe,fruit, commercial ripe, proteome

Huiqin Ma
contact affiliation	Department of Fruit Tree Sciences, College of Horticulture, China Agricultural University, Beijing 100193, China
contact email	hqma@cau.edu.cn
lab head
Yuanyuan Cui
contact affiliation	China Agricultural University
contact email	cuiyy@cau.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD009757

PRIDE project URI

• PRIDE
  1. PXD009757
     1. Label: PRIDE project
     2. Name: Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.)