PXD009757 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.) |
Description | Fig fruit are highly perishable at the tree-ripe (TR) stage. Commercial-ripe (CR) fruit, which are harvested before the TR stage for their postharvest transportability and shelf-life advantage, are inferior to TR fruit in size, color and sugar content. The succulent urn-shaped receptacle serves as the protective structure and edible part of the fruit, and determines fruit quality. Quantitative iTRAQ reveal the proteins and transcripts that are differentially expressed in fig receptacle at the two harvest stages. We annotated 691 proteins against uni_Moraceae_3487, of which 59 showed ≤1.3 -fold change—in TR vs CR fruit. Ficin was the most abundant soluble protein in the fig receptacle. A high abundance of aminocyclopropane-1-carboxylate oxidase was identified. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:45:24.351.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yuanyuan Cui |
SpeciesList | scientific name: Ficus carica; NCBI TaxID: 3494; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-05-11 05:40:10 | ID requested | |
1 | 2019-03-22 05:11:24 | announced | |
2 | 2019-03-23 01:30:21 | announced | Updated project metadata. |
3 | 2019-04-23 02:42:53 | announced | Updated project metadata. |
⏵ 4 | 2024-10-22 04:45:25 | announced | 2024-10-22: Updated project metadata. |
Publication List
Cui Y, Wang Z, Chen S, Vainstein A, Ma H, Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.). BMC Plant Biol, 19(1):146(2019) [pubmed] |
10.1186/s12870-019-1742-x; |
Keyword List
curator keyword: Biological |
submitter keyword: tree ripe,fruit, commercial ripe, proteome |
Contact List
Huiqin Ma |
contact affiliation | Department of Fruit Tree Sciences, College of Horticulture, China Agricultural University, Beijing 100193, China |
contact email | hqma@cau.edu.cn |
lab head | |
Yuanyuan Cui |
contact affiliation | China Agricultural University |
contact email | cuiyy@cau.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009757
- Label: PRIDE project
- Name: Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.)