PXD009748

PXD009748 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proximity labeling and identification of the proteins that interact with Siglec-14 on THP-1 cells
Description	Proteins that interact with Siglec-14 were identified by proximity labeling, followed by streptavidin affinity purification and proteomic analysis. MaxQuant software was used for the quantitative analysis of the proteins identified.
HostingRepository	PRIDE
AnnounceDate	2018-11-04
AnnouncementXML	Submission_2018-11-04_13:59:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jimmy Huang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; acetylated residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-11 01:29:40	ID requested
⏵ 1	2018-11-04 13:59:49	announced

Publication List

Huang PJ, Low PY, Wang I, Hsu SD, Angata T, Soluble Siglec-14 glycan-recognition protein is generated by alternative splicing and suppresses myeloid inflammatory responses. J Biol Chem, 293(51):19645-19658(2018) [pubmed]

Huang PJ, Low PY, Wang I, Hsu SD, Angata T, Soluble Siglec-14 glycan-recognition protein is generated by alternative splicing and suppresses myeloid inflammatory responses. J Biol Chem, 293(51):19645-19658(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Siglec-14, cis-ligand, proximity labeling, THP-1

curator keyword: Biological

submitter keyword: Siglec-14, cis-ligand, proximity labeling, THP-1

Contact List

Takashi Angata
contact affiliation	Institute of Biochemical Sciences, National Taiwan University and Institute of Biological Chemistry, Academia Sinica
contact email	angata@gate.sinica.edu.tw
lab head
Jimmy Huang
contact affiliation	IBC, Academia Sinica.
contact email	ptgoplay@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD009748
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD009748

PRIDE project URI

Repository Record List

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