PXD009698 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Transcriptomic and proteomic responses of the oceanic diatom Pseudo-nitzschia granii to iron limitation |
Description | The oceanic diatom Pseudo-nitzschia granii was cultured in the laboratory under steady-state iron-replete and iron-limited conditions. Transcriptomic and proteomic analyses were performed to determine how this organism reorganizes major metabolic processes as a function of iron supply. |
HostingRepository | PRIDE |
AnnounceDate | 2018-08-21 |
AnnouncementXML | Submission_2018-08-21_09:01:55.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD009698 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Natalie Cohen |
SpeciesList | scientific name: Pseudo-nitzschia granii; NCBI TaxID: 476440; |
ModificationList | Phospho; Oxidation; Carbamidomethyl |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-05-07 05:55:31 | ID requested | |
⏵ 1 | 2018-08-21 09:01:56 | announced | |
Publication List
Cohen NR, Gong W, Moran DM, McIlvin MR, Saito MA, Marchetti A, Transcriptomic and proteomic responses of the oceanic diatom Pseudo-nitzschia granii to iron limitation. Environ Microbiol, 20(8):3109-3126(2018) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: diatom, iron limitation |
Contact List
Mak A. Saito |
contact affiliation | Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole MA 02543 |
contact email | msaito@whoi.edu |
lab head | |
Natalie Cohen |
contact affiliation | Woods Hole Oceanographic Institution |
contact email | ncohen@whoi.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/08/PXD009698 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009698
- Label: PRIDE project
- Name: Transcriptomic and proteomic responses of the oceanic diatom Pseudo-nitzschia granii to iron limitation