PXD009630

PXD009630 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Malignant Melanoma - Improved survival prognostication of node-positive malignant melanoma patients utilizing shotgun proteomics guided by histopathological characterization and genomic data
Description	In depth histopathology analysis of melanoma lymph node metastases combined with deep-mining protein expression analysis, clinical data and genomic profile information, in the search for novel protein markers to predict progression and survival of melanoma
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:43:36.696.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Lazaro Hiram Betancourt Nunez
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-30 05:33:17	ID requested
1	2019-03-29 10:40:22	announced
2	2019-04-01 01:56:43	announced	Updated publication reference for PubMed record(s): 30914758.
⏵ 3	2024-10-22 04:43:44	announced	2024-10-22: Updated project metadata.

Publication List

Betancourt LH, Paw, ł, owski K, Eriksson J, Szasz AM, Mitra S, Pla I, Welinder C, Ekedahl H, Broberg P, Appelqvist R, Yakovleva M, Sugihara Y, Miharada K, Ingvar C, Lundgren L, Baldetorp B, Olsson H, Rezeli M, Wieslander E, Horvatovich P, Malm J, J, ö, nsson G, Marko-Varga G, Improved survival prognostication of node-positive malignant melanoma patients utilizing shotgun proteomics guided by histopathological characterization and genomic data. Sci Rep, 9(1):5154(2019) [pubmed]
10.1038/s41598-019-41625-z;

Betancourt LH, Paw, ł, owski K, Eriksson J, Szasz AM, Mitra S, Pla I, Welinder C, Ekedahl H, Broberg P, Appelqvist R, Yakovleva M, Sugihara Y, Miharada K, Ingvar C, Lundgren L, Baldetorp B, Olsson H, Rezeli M, Wieslander E, Horvatovich P, Malm J, J, ö, nsson G, Marko-Varga G, Improved survival prognostication of node-positive malignant melanoma patients utilizing shotgun proteomics guided by histopathological characterization and genomic data. Sci Rep, 9(1):5154(2019) [pubmed]

10.1038/s41598-019-41625-z;

Keyword List

curator keyword: Biomedical
submitter keyword: proteomics, histopathology, clinical data, tumor,Malignant Melanoma

curator keyword: Biomedical

submitter keyword: proteomics, histopathology, clinical data, tumor,Malignant Melanoma

Contact List

Gyorgy Marko-Varga
contact affiliation	Div. Clinical Protein Science & Imaging Clinical Sciences & Biomedical Engineering Lund University Sweden
contact email	gyorgy.marko-varga@bme.lth.se
lab head
Lazaro Hiram Betancourt Nunez
contact affiliation	Lund University
contact email	lazaro.betancourt@med.lu.se
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD009630
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD009630

PRIDE project URI

Repository Record List

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