PXD009560

PXD009560 is an original dataset announced via ProteomeXchange.

Title	Time-resolved phosphoproteomic analysis of ZIKV-infected cells
Description	To investigate cellular pathway dysregulation upon ZIKV infection, time-resolved phosphoproteomics LC-MS/MS analysis was used. ZIKV-infected SK-N-BE2 cells or mock-treated cells were harvested 24, 48 and 72 hours post virus infection and their phosphoproteome was quantitatively analyzed by label-free LC-MS/MS.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:44:39.560.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Pietro Scaturro
SpeciesList	scientific name: Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013; NCBI TaxID: 2043570; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-20 07:09:21	ID requested
1	2018-09-03 01:02:31	announced
2	2018-09-05 04:31:14	announced	Updated publication reference for PubMed record(s): 30177828.
⏵ 3	2024-10-22 04:44:43	announced	2024-10-22: Updated project metadata.

10.1038/s41586-018-0484-5;

Scaturro P, Stukalov A, Haas DA, Cortese M, Draganova K, P, ł, aszczyca A, Bartenschlager R, G, ö, tz M, Pichlmair A, An orthogonal proteomic survey uncovers novel Zika virus host factors. Nature, 561(7722):253-257(2018) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: Phosphoproteomics, TiO4,ZIKV H/PF/2013, SK-N-BE2 cells

Andreas Pichlmair
contact affiliation	Immunopathology of Virus Infections Institute of Virology Technical University of Munich Munich, Germany
contact email	andreas.pichlmair@tum.de
lab head
Pietro Scaturro
contact affiliation	Systems Arbovirology, Leibniz Institute of Virology
contact email	pietro.scaturro@tum.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD009560

PRIDE project URI

• PRIDE
  1. PXD009560
     1. Label: PRIDE project
     2. Name: Time-resolved phosphoproteomic analysis of ZIKV-infected cells