PXD009551 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Global Interactome of ZIKV (FSS13025) viral proteins. |
Description | To identify the global cellular interactome of each ZIKV proteins, individual HA-tagged ZIKV proteins (FSS13025 Asian strain) were expressed in the neuroblastoma cell line SK-N-BE2 using lentivirus-mediated delivery. Cellular lysates were subjected to Affinity purification (AP) using HA-agarose beads, and eluates digested with Trypsin and LysC before analysis via LC-MS/MS using an Orbitrap instrument. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:44:36.424.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Pietro Scaturro |
SpeciesList | scientific name: Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013; NCBI TaxID: 2043570; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | acetylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-04-20 01:33:37 | ID requested | |
1 | 2018-09-03 01:19:50 | announced | |
2 | 2018-09-05 04:41:05 | announced | Updated publication reference for PubMed record(s): 30177828. |
⏵ 3 | 2024-10-22 04:44:44 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1038/s41586-018-0484-5; |
Scaturro P, Stukalov A, Haas DA, Cortese M, Draganova K, P, ł, aszczyca A, Bartenschlager R, G, ö, tz M, Pichlmair A, An orthogonal proteomic survey uncovers novel Zika virus host factors. Nature, 561(7722):253-257(2018) [pubmed] |
Keyword List
curator keyword: Biological, Biomedical |
submitter keyword: ZIKV, Asian strain FSS13025, Interactome, Zika virus |
Contact List
Andreas Pichlmair |
contact affiliation | Immunopathology of Virus Infections Institute of Virology Technical University of Munich Munich, Germany |
contact email | andreas.pichlmair@tum.de |
lab head | |
Pietro Scaturro |
contact affiliation | Systems Arbovirology, Leibniz Institute of Virology |
contact email | pietro.scaturro@tum.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD009551 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009551
- Label: PRIDE project
- Name: Global Interactome of ZIKV (FSS13025) viral proteins.