PXD009551

PXD009551 is an original dataset announced via ProteomeXchange.

Title	Global Interactome of ZIKV (FSS13025) viral proteins.
Description	To identify the global cellular interactome of each ZIKV proteins, individual HA-tagged ZIKV proteins (FSS13025 Asian strain) were expressed in the neuroblastoma cell line SK-N-BE2 using lentivirus-mediated delivery. Cellular lysates were subjected to Affinity purification (AP) using HA-agarose beads, and eluates digested with Trypsin and LysC before analysis via LC-MS/MS using an Orbitrap instrument.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:44:36.424.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Pietro Scaturro
SpeciesList	scientific name: Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013; NCBI TaxID: 2043570; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-20 01:33:37	ID requested
1	2018-09-03 01:19:50	announced
2	2018-09-05 04:41:05	announced	Updated publication reference for PubMed record(s): 30177828.
⏵ 3	2024-10-22 04:44:44	announced	2024-10-22: Updated project metadata.

10.1038/s41586-018-0484-5;

Scaturro P, Stukalov A, Haas DA, Cortese M, Draganova K, P, ł, aszczyca A, Bartenschlager R, G, ö, tz M, Pichlmair A, An orthogonal proteomic survey uncovers novel Zika virus host factors. Nature, 561(7722):253-257(2018) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: ZIKV, Asian strain FSS13025, Interactome, Zika virus

Andreas Pichlmair
contact affiliation	Immunopathology of Virus Infections Institute of Virology Technical University of Munich Munich, Germany
contact email	andreas.pichlmair@tum.de
lab head
Pietro Scaturro
contact affiliation	Systems Arbovirology, Leibniz Institute of Virology
contact email	pietro.scaturro@tum.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD009551

PRIDE project URI

• PRIDE
  1. PXD009551
     1. Label: PRIDE project
     2. Name: Global Interactome of ZIKV (FSS13025) viral proteins.