PXD009493 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | D2Ome - rate constant estimation from heavy water metabolic labeling and LC-MS |
Description | We developed a software for extraction of protein decay rate constants from heavy water labeling followed by LC-MS experiments. We illustrate the program on application to normal diet and western diet fed LDLR-/- mice. We demonstrate that proteins subunits of 40S ribosomal complex have reduced stability in western diet fet mice. |
HostingRepository | PRIDE |
AnnounceDate | 2019-04-10 |
AnnouncementXML | Submission_2019-04-10_05:41:08.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD009493 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Ahmad Borzoo |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | Deamidated; Oxidation; Acetyl; Carbamidomethyl; GlyGly |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-04-13 02:07:48 | ID requested | |
⏵ 1 | 2019-04-10 05:41:09 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Technical |
submitter keyword: Heavy water labeling, Protein turnover, Software |
Contact List
Rovshan G. Sadygov |
contact affiliation | UTMB |
contact email | rovshan.sadygov@utmb.edu |
lab head | |
Ahmad Borzoo |
contact affiliation | UTMB |
contact email | ahborzou@utmb.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009493 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009493
- Label: PRIDE project
- Name: D2Ome - rate constant estimation from heavy water metabolic labeling and LC-MS