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PXD009480

PXD009480 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSpatial connectomics to identify agents relevant to lignocellulose deconstruction in fungi
DescriptionCharacterization of secretome of two white rot and two brown rot fungal species grown on aspen. Goal is to utilize temporal sampling to assist in elucidating lignocellulose degradation mechanism
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:44:30.940.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD009480
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterMatthew Monroe
SpeciesList scientific name: Serpula lacrymans; NCBI TaxID: 85982; scientific name: Postia placenta; NCBI TaxID: 104341; scientific name: Gloeophyllum trabeum (Brown rot fungus); NCBI TaxID: 104355; scientific name: Trametes versicolor; NCBI TaxID: 5325;
ModificationListOxidation; Carbamidomethyl
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-04-12 03:09:58ID requested
12018-07-16 04:09:22announced
22018-08-08 09:34:00announcedUpdated publication reference for PubMed record(s): 29884760.
32024-10-22 04:44:39announced2024-10-22: Updated project metadata.
Publication List
10.1128/aem.00159-18;
Presley GN, Panisko E, Purvine SO, Schilling JS, Coupling Secretomics with Enzyme Activities To Compare the Temporal Processes of Wood Metabolism among White and Brown Rot Fungi. Appl Environ Microbiol, 84(16):(2018) [pubmed]
10.6019/PXD009480;
Keyword List
curator keyword: Biological
submitter keyword: lignocellulose,proteomics, fungi
Contact List
Jonathan Schilling
contact affiliationUniversity of Minnesota
contact emailschillin@umn.edu
lab head
Matthew Monroe
contact affiliationPacific Northwest National Laboratory
contact emailmatthew.monroe@pnnl.gov
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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