PXD009480

PXD009480 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Spatial connectomics to identify agents relevant to lignocellulose deconstruction in fungi
Description	Characterization of secretome of two white rot and two brown rot fungal species grown on aspen. Goal is to utilize temporal sampling to assist in elucidating lignocellulose degradation mechanism
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:44:30.940.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD009480
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Serpula lacrymans; NCBI TaxID: 85982; scientific name: Postia placenta; NCBI TaxID: 104341; scientific name: Gloeophyllum trabeum (Brown rot fungus); NCBI TaxID: 104355; scientific name: Trametes versicolor; NCBI TaxID: 5325;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-12 03:09:58	ID requested
1	2018-07-16 04:09:22	announced
2	2018-08-08 09:34:00	announced	Updated publication reference for PubMed record(s): 29884760.
⏵ 3	2024-10-22 04:44:39	announced	2024-10-22: Updated project metadata.

Publication List

10.1128/aem.00159-18;
Presley GN, Panisko E, Purvine SO, Schilling JS, Coupling Secretomics with Enzyme Activities To Compare the Temporal Processes of Wood Metabolism among White and Brown Rot Fungi. Appl Environ Microbiol, 84(16):(2018) [pubmed]
10.6019/PXD009480;

10.1128/aem.00159-18;

Presley GN, Panisko E, Purvine SO, Schilling JS, Coupling Secretomics with Enzyme Activities To Compare the Temporal Processes of Wood Metabolism among White and Brown Rot Fungi. Appl Environ Microbiol, 84(16):(2018) [pubmed]

10.6019/PXD009480;

Keyword List

curator keyword: Biological
submitter keyword: lignocellulose,proteomics, fungi

curator keyword: Biological

submitter keyword: lignocellulose,proteomics, fungi

Contact List

Jonathan Schilling
contact affiliation	University of Minnesota
contact email	schillin@umn.edu
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD009480
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD009480

PRIDE project URI

Repository Record List

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