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PXD009449

PXD009449 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSystematic characterization of 21 post-translational modification using synthetic peptides
DescriptionThe data presented in this study in the - context of the ProteoemTools project - is based on the synthesis of about 5000 synthetic peptides carrying 21 different post-translational modifications to systematically characterize their chromatographic and mass spectrometric properties using multimodal LC-MS/MS.
HostingRepositoryPRIDE
AnnounceDate2018-06-04
AnnouncementXMLSubmission_2018-06-04_06:16:20.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterDaniel Zolg
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListmonomethylated residue; 3'-nitro-L-tyrosine; N6-malonyl-L-lysine; biotinylated residue; phosphorylated residue; N6: N6; acetylated residue; dimethylated residue; iodoacetamide derivatized residue; L-citrulline; succinylated residue; ubiquitination signature dipeptidyl lysine; N6-crotonyl-L-lysine; formylated residue; monohydroxylated proline
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-04-10 01:49:58ID requested
12018-06-04 06:16:21announced
Publication List
Zolg DP, Wilhelm M, Schmidt T, M├ędard G, Zerweck J, Knaute T, Wenschuh H, Reimer U, Schnatbaum K, Kuster B, ProteomeTools: Systematic Characterization of 21 Post-translational Protein Modifications by Liquid Chromatography Tandem Mass Spectrometry (LC-MS/MS) Using Synthetic Peptides. Mol Cell Proteomics, 17(9):1850-1863(2018) [pubmed]
Keyword List
ProteomeXchange project tag: ProteomeTools
curator keyword: Technical
submitter keyword: ProteomeTools, synthetic peptides, PTM, post-translational modification, synthetic standard, acetylation, phosphorylation, diagnostic ion, immonium ion, neutral loss
Contact List
Bernhard Kuster
contact affiliationChair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany
contact emailkuster@tum.de
lab head
Daniel Zolg
contact affiliationTechnical University of Munich
contact emaildaniel.zolg@tum.de
dataset submitter
Full Dataset Link List
Dataset FTP location
PRIDE project URI
Repository Record List
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