PXD009284

PXD009284 is an original dataset announced via ProteomeXchange.

Title	DNA repair proximity landscape analysis reveals shieldin as a key regulator of NHEJ-dependent processes
Description	By combining proximity labeling with quantitative mass spectrometry, we generated high-resolution interaction neighborhood maps of the endogenously expressed DNA repair factors 53BP1, BRCA1, and MDC1.
HostingRepository	PRIDE
AnnounceDate	2018-04-13
AnnouncementXML	Submission_2018-04-25_06:24:47.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Rajat Gupta
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-03-21 08:43:16	ID requested
1	2018-04-13 03:21:42	announced
⏵ 2	2018-04-25 06:24:48	announced	Updated publication reference for PubMed record(s): 29656893.

Gupta R, Somyajit K, Narita T, Maskey E, Stanlie A, Kremer M, Typas D, Lammers M, Mailand N, Nussenzweig A, Lukas J, Choudhary C, DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity. Cell, 173(4):972-988.e23(2018) [pubmed]

curator keyword: Biological

submitter keyword: DNA damage repair, proximity labeling, shieldin

Chunaram Choudhary
contact affiliation	Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark
contact email	chuna.choudhary@cpr.ku.dk
lab head
Rajat Gupta
contact affiliation	The Novo Nordisk Foundation center for Protein Research
contact email	rajat.gupta@cpr.ku.dk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/04/PXD009284

PRIDE project URI

• PRIDE
  1. PXD009284
     1. Label: PRIDE project
     2. Name: DNA repair proximity landscape analysis reveals shieldin as a key regulator of NHEJ-dependent processes