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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2018-10-11
  • AnnouncementXML: Submission_2018-10-11_00:30:18.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Jianhua Guo
  • Title: Proteomic analysis of E. coli K-12 LE392, P. putida KT2440 under exposure of carbamazepine
  • Description: The goals of this study are to use SWATH-MS to detect bacterial proteomic profiles of wild-type E. coli K-12 LE392, P. putida KT2440, and their quantitative protein response under the exposure of antiepileptic drug carbamazepine. Three concentrations of carbamazepine were applied, which were 0.05 mg/L, 10.0 mg/L and 50.0 mg/L. The group without dosing carbamazepine was the control group. Each concentration was conducted in triplicate. By comparing the proteomic profiles of experimental groups and control group, the effects of carbamazepine on bacterial translational levels can be revealed.
  • SpeciesList: scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Pseudomonas putida KT2440; NCBI TaxID: 160488;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: TripleTOF 5600

Dataset History

VersionDatetimeStatusChangeLog Entry
02018-03-21 05:09:06ID requested
12018-10-10 08:03:33announced
22018-10-11 00:30:19announcedUpdated project metadata.

Publication List

  1. Wang Y, Lu J, Mao L, Li J, Yuan Z, Bond PL, Guo J, Antiepileptic drug carbamazepine promotes horizontal transfer of plasmid-borne multi-antibiotic resistance genes within and across bacterial genera. ISME J, ():(2018) [pubmed]

Keyword List

  1. curator keyword: Biomedical
  2. submitter keyword: E. coli, P. putida, carbamazepine, SWATH-MS

Contact List

    Jianhua Guo
    • contact affiliation: Advanced Water Management Centre, The University of Queensland, St. Lucia, Brisbane, Queensland, Australia, 4072
    • contact email: j.guo@awmc.uq.edu.au
    • lab head:
    Jianhua Guo
    • contact affiliation: University of Queensland
    • contact email: j.guo@awmc.uq.edu.au
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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