PXD009091

PXD009091 is an original dataset announced via ProteomeXchange.

Title	Histone lysine acetylation, butyrylation, and crotonylation dynamics and functional interplay in rice under starvation and submergence
Description	Histone lysine acylations are regulated by primary metabolism in animal cells. However, histone non-acetyl acylation is not yet studied in plants that have distinct primary metabolic pathways. In this work, we detected rice histone lysine butyrylation (Kbu) and crotonylation (Kcr) sites by mass spectrometry, and found both similar and specific acylation patterns compared with that in mammalian cells.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:43:34.967.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	qiutao xu
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationList	N6-crotonyl-L-lysine; N6-butanoyl-L-lysine
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-03-02 01:37:33	ID requested
1	2018-09-06 06:16:12	announced
2	2019-02-12 08:40:44	announced	Updated publication reference for PubMed record(s): 30253806.
⏵ 3	2024-10-22 04:43:43	announced	2024-10-22: Updated project metadata.

10.1186/s13059-018-1533-y;

Lu Y, Xu Q, Liu Y, Yu Y, Cheng ZY, Zhao Y, Zhou DX, Dynamics and functional interplay of histone lysine butyrylation, crotonylation, and acetylation in rice under starvation and submergence. Genome Biol, 19(1):144(2018) [pubmed]

curator keyword: Biological

submitter keyword: crotonylation, butyrylation, Histone,Rice

Dao-Xiu Zhou
contact affiliation	Institute of Plant Science of Paris-Saclay (IPS2), CNRS, INRA, Université Paris-sud 11, Université Paris-Saclay, 91405 Orsay, France
contact email	dao-xiu.zhou@u-psud.fr
lab head
qiutao xu
contact affiliation	Huazhong Agricultural University
contact email	skyyks123@webmail.hzau.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD009091

PRIDE project URI

• PRIDE
  1. PXD009091
     1. Label: PRIDE project
     2. Name: Histone lysine acetylation, butyrylation, and crotonylation dynamics and functional interplay in rice under starvation and submergence