PXD008953

PXD008953 is an original dataset announced via ProteomeXchange.

Title	Proteome and acetylome of Sulfurospirillum halorespirans during long-term downregulation of organohalide respiratory genes
Description	Organohalide respiration is an environmentally relevant type of anaerobic respiration. We show that Sulfurospirillum halorespirans undergoes the same type of downregulation of the organohalide respiratory genes as had been overserved before in S. multivorans when cultivated without chlorinated ethenes for a long period of time. We compared the proteomes and acetylomes of S. halorespirans cells cultivated in the presence of PCE with those of cells long- and short-term cultivated with nitrate as sole electron acceptor.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:42:49.293.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Dominique Türkowsky
SpeciesList	scientific name: Sulfurospirillum halorespirans DSM 13726; NCBI TaxID: 1193502;
ModificationList	acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-02-14 01:37:51	ID requested
1	2018-04-05 03:04:55	announced
2	2018-04-25 06:35:57	announced	Updated publication reference for PubMed record(s): 29617628.
⏵ 3	2024-10-22 04:42:56	announced	2024-10-22: Updated project metadata.

10.1016/j.jprot.2018.03.030;

T, ü, rkowsky D, Esken J, Goris T, Schubert T, Diekert G, Jehmlich N, von Bergen M, A Retentive Memory of Tetrachloroethene Respiration in Sulfurospirillum halorespirans - involved Proteins and a possible link to Acetylation of a Two-Component Regulatory System. J Proteomics, 181():36-46(2018) [pubmed]

curator keyword: Biological

submitter keyword: two-component regulatory system

acetylomics

proteomics

LC-MS/MS

bioremediation

dehalorespiration, Thermo QExactive

Sulfurospirillum halorespirans

Organohalide respiration

tetrachloroethene

nitrate

reductive dehalogenation

Martin von Bergen
contact affiliation	Helmholtz Centre for Environmental Research – UFZ Department of Molecular Systems Biology Permoserstr. 15 04318 Leipzig, Germany
contact email	martin.vonbergen@ufz.de
lab head
Dominique Türkowsky
contact affiliation	Helmholtz Centre for Environmental Research - UFZ
contact email	dominique.tuerkowsky@ufz.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/04/PXD008953

PRIDE project URI

• PRIDE
  1. PXD008953
     1. Label: PRIDE project
     2. Name: Proteome and acetylome of Sulfurospirillum halorespirans during long-term downregulation of organohalide respiratory genes