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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2018-11-07
  • AnnouncementXML: Submission_2018-12-21_01:30:20.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Prem Prakash Das
  • Title: Differential regulation of tobacco host factors upon TMV infection
  • Description: Tobacco mosaic virus (TMV) became one of the model virus for fundamental biological research and understanding of the host-pathogen interaction. It utilizes host machinery smartly to complete the life cycle, though many parts of life cycle remained a mystery, such as host factors involved in virus replication processes. We utilized the 8-Plex iTRAQ study to understand host-pathogen interaction between TMV and host tobacco.
  • SpeciesList: scientific name: Nicotiana tabacum (Common tobacco); NCBI TaxID: 4097;
  • ModificationList: iTRAQ8plex-116 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
  • Instrument: TripleTOF 5600

Dataset History

VersionDatetimeStatusChangeLog Entry
02018-02-01 09:55:22ID requested
12018-11-07 02:30:33announced
22018-12-21 01:30:21announcedUpdated publication reference for PubMed record(s): 30503828.

Publication List

  1. Das PP, Lin Q, Wong SM, Comparative proteomics of Tobacco mosaic virus-infected Nicotiana tabacum plants identified major host proteins involved in photosystems and plant defence. J Proteomics, 194():191-199(2019) [pubmed]

Keyword List

  1. curator keyword: Biological
  2. submitter keyword: TMV, Tobacco, iTRAQ

Contact List

    Prof Wong Sek Man
    • contact affiliation: Department of Biological Science, National University of Singapore
    • contact email: dbswsm@nus.edu.sg
    • lab head:
    Prem Prakash Das
    • contact affiliation: National University of Singapore
    • contact email: a0135575@u.nus.edu
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

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