PXD008832

PXD008832 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Evaluation of preservation quality and viability of FFPE ovarian cancer tissue samples
Description	Analysis of 60 FFPE (formalin-fixed, paraffin-embedded) ovarian cancer tissue samples to evaluate preservation quality and viability of global and phosphoproteomic analysis
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_03:59:21.623.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD008832
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Phospho; TMT6plex; Oxidation; Carbamidomethyl
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-02-01 07:25:20	ID requested
1	2018-10-19 13:26:32	announced
⏵ 2	2024-10-22 03:59:27	announced	2024-10-22: Updated project metadata.

Publication List

Piehowski PD, Petyuk VA, Sontag RL, Gritsenko MA, Weitz KK, Fillmore TL, Moon J, Makhlouf H, Chuaqui RF, Boja ES, Rodriguez H, Lee JSH, Smith RD, Carrick DM, Liu T, Rodland KD, Residual tissue repositories as a resource for population-based cancer proteomic studies. Clin Proteomics, 15():26(2018) [pubmed]
10.1186/s12014-018-9202-4;
10.6019/PXD008832;

Piehowski PD, Petyuk VA, Sontag RL, Gritsenko MA, Weitz KK, Fillmore TL, Moon J, Makhlouf H, Chuaqui RF, Boja ES, Rodriguez H, Lee JSH, Smith RD, Carrick DM, Liu T, Rodland KD, Residual tissue repositories as a resource for population-based cancer proteomic studies. Clin Proteomics, 15():26(2018) [pubmed]

10.1186/s12014-018-9202-4;

10.6019/PXD008832;

Keyword List

ProteomeXchange project tag: CPTAC Consortium
curator keyword: Biomedical
submitter keyword: Ovarian Cancer, proteomics,FFPE, phosphoproteomics

ProteomeXchange project tag: CPTAC Consortium

curator keyword: Biomedical

submitter keyword: Ovarian Cancer, proteomics,FFPE, phosphoproteomics

Contact List

Karin Rodland
contact affiliation	Pacific Northwest National Laboratory
contact email	Karin.Rodland@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD008832
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD008832

PRIDE project URI

Repository Record List

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