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PXD008775

PXD008775 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleHLA-DM-mediated HLA-DR3 Immunopeptidome
DescriptionT2 cells stably expressing HLA-DR3 and variable amounts of HLA-DM (none, low, and high, per GFP co-expression) were lysed and HLA-DR3-peptide complexes were isolated via immunoprecipitation. Antigenic peptides were then eluted and quantified by LC-MS/MS to assess presented antigenic epitopes.
HostingRepositoryPRIDE
AnnounceDate2018-04-16
AnnouncementXMLSubmission_2018-05-23_01:01:27.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterEliot Morrison
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListiodoacetamide derivatized residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-01-29 00:45:54ID requested
12018-04-16 01:38:22announced
22018-05-23 01:01:28announcedUpdated publication reference for PubMed record(s): 29774024.
Publication List
Á, lvaro-Benito M, Morrison E, Abualrous ET, Kuropka B, Freund C, Quantification of HLA-DM-Dependent Major Histocompatibility Complex of Class II Immunopeptidomes by the Peptide Landscape Antigenic Epitope Alignment Utility. Front Immunol, 9():872(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: HLA-DR, HLA-DM, Immunopeptidome
Contact List
Christian Freund
contact affiliationProtein Biochemistry, Institute for Biochemistry, Freie Universität Berlin, Berlin, Germany
contact emailchfreund@zedat.fu-berlin.de
lab head
Eliot Morrison
contact affiliationFU Berlin
contact emaileliot.morrison@fu-berlin.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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