⮝ Full datasets listing

PXD008744

PXD008744 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleStreptococcus agalactiae Panproteome
DescriptionStreptococcus agalactiae (Lancefield’s group B Streptococcus, GBS) is a major bacterial species of genus Streptococcus and has medical and veterinary importance by affecting mainly humans (Maione et al., 2005; Johri et al., 2006), cattle (Keefe, 1997) and fish (Mian et al., 2009). The GBS is the most important pathogen for the Nile tilapia, a global commodity of the aquaculture sector, causing outbreaks of septicemia and meningoencephalitis (Hernández et al., 2009; Mian et al., 2009). This study aimed to evaluate the global abundancy of proteins among the main genotypes of GBS isolated from fish identified in Brazil using a label free shotgun liquid chromatography-ultra definition mass spectrometry (LC-UDMSE) approach and to compare the differential expression of proteins identified between isolates from fish and human.
HostingRepositoryPRIDE
AnnounceDate2019-01-14
AnnouncementXMLSubmission_2019-01-14_04:22:26.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterHenrique César Pereira Figueiredo
SpeciesList scientific name: Streptococcus agalactiae; NCBI TaxID: 1311;
ModificationListNo PTMs are included in the dataset
InstrumentSynapt MS
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-01-24 02:30:20ID requested
12019-01-14 04:22:27announced
Publication List
Tavares GC, Pereira FL, Barony GM, Rezende CP, da Silva WM, de Souza GHMF, Verano-Braga T, de Carvalho Azevedo VA, Leal CAG, Figueiredo HCP, Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach. BMC Genomics, 20(1):11(2019) [pubmed]
Keyword List
curator keyword: Biological, Biomedical
submitter keyword: SA16, SA20, SA53, SA81, SA95, GBS, panproteome
Contact List
Henrique Cesar Pereira Figueiredo
contact affiliationNational Reference Laboratory for Aquatic Animals Diseases Federal University of Minas Gerais Brazil
contact emailfigueiredoh@yahoo.com
lab head
Henrique César Pereira Figueiredo
contact affiliationNational Reference Laboratory for Aquatic Animal Diseases Federal University of Minas Gerais
contact emailfigueiredoh@yahoo.com
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD008744
PRIDE project URI
Repository Record List
[ + ]