PXD008621

PXD008621 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The role of cadaverine synthesis on pneumococcal capsule and protein expression.
Description	S. pneumoniae TIGR4 wild type strain and lysine decarboxylase deficient strain were cultured in quadruplicate in THY. Proteins were isolated, quantified, trypsin digested and analyzed by 1D LC ESI MS/MS.
HostingRepository	PRIDE
AnnounceDate	2018-01-24
AnnouncementXML	Submission_2018-01-25_01:36:31.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Caleb Benson
SpeciesList	scientific name: Streptococcus pneumoniae TIGR4; NCBI TaxID: 170187;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-01-09 01:54:18	ID requested
⏵ 1	2018-01-25 01:36:32	announced

Publication List

Nakamya MF, Ayoola MB, Park S, Shack LA, Swiatlo E, Nanduri B, The Role of Cadaverine Synthesis on Pneumococcal Capsule and Protein Expression. Med Sci (Basel), 6(1):(2018) [pubmed]

Nakamya MF, Ayoola MB, Park S, Shack LA, Swiatlo E, Nanduri B, The Role of Cadaverine Synthesis on Pneumococcal Capsule and Protein Expression. Med Sci (Basel), 6(1):(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Streptococcus pneumoniae, polyamines, pneumococcal pneumonia, proteomics, capsule, complementation, metabolism, cadaverine.

curator keyword: Biological

submitter keyword: Streptococcus pneumoniae, polyamines, pneumococcal pneumonia, proteomics, capsule, complementation, metabolism, cadaverine.

Contact List

Bindu Nanduri
contact affiliation	Department of Basic Sciences College Of Veterinary Medicine Mississippi State University Mississippi State, MS 39762(lab head)
contact email	nanduribindu@gmail.com
lab head
Caleb Benson
contact affiliation	Mississippi State University
contact email	cb1579@msstate.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD008621
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD008621

PRIDE project URI

Repository Record List

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