PXD008192 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Multi-omic biogeography of the gastrointestinal microbiota of a pre-weaned lamb |
Description | Here, we used reverse-phase liquid chromatography-coupled tandem mass spectrometry to study the pre-weaned lamb proteome and metaproteome in ten different gastrointestinal tracts: rumen, reticulum, omasum, abomasum, duodenum, jejunum, ileum, cecum, colon, and rectum. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:37:00.442.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Antonio Palomba |
SpeciesList | scientific name: Microbiota; NCBI TaxID: 13613; scientific name: Ovis aries; NCBI TaxID: 9940; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-11-13 01:44:15 | ID requested | |
1 | 2017-12-14 02:21:55 | announced | |
2 | 2018-05-23 06:59:16 | announced | Updated publication reference for PubMed record(s): 29258228. |
⏵ 3 | 2024-10-22 04:37:03 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.3390/proteomes5040036; |
Palomba A, Tanca A, Fraumene C, Abbondio M, Fancello F, Atzori AS, Uzzau S, Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb. Proteomes, 5(4):(2017) [pubmed] |
Keyword List
curator keyword: Metaproteomics, Biological |
submitter keyword: ruminant,Metaproteomics, mucosa, microbial community, sheep |
Contact List
Sergio Uzzau |
contact affiliation | Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy |
contact email | Uzzau@portocontericerche.it |
lab head | |
Antonio Palomba |
contact affiliation | Porto Conte Ricerche |
contact email | palomba@portocontericerche.it |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD008192 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD008192
- Label: PRIDE project
- Name: Multi-omic biogeography of the gastrointestinal microbiota of a pre-weaned lamb