PXD008192

PXD008192 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Multi-omic biogeography of the gastrointestinal microbiota of a pre-weaned lamb
Description	Here, we used reverse-phase liquid chromatography-coupled tandem mass spectrometry to study the pre-weaned lamb proteome and metaproteome in ten different gastrointestinal tracts: rumen, reticulum, omasum, abomasum, duodenum, jejunum, ileum, cecum, colon, and rectum.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:37:00.442.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Antonio Palomba
SpeciesList	scientific name: Microbiota; NCBI TaxID: 13613; scientific name: Ovis aries; NCBI TaxID: 9940;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-11-13 01:44:15	ID requested
1	2017-12-14 02:21:55	announced
2	2018-05-23 06:59:16	announced	Updated publication reference for PubMed record(s): 29258228.
⏵ 3	2024-10-22 04:37:03	announced	2024-10-22: Updated project metadata.

Publication List

10.3390/proteomes5040036;
Palomba A, Tanca A, Fraumene C, Abbondio M, Fancello F, Atzori AS, Uzzau S, Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb. Proteomes, 5(4):(2017) [pubmed]

10.3390/proteomes5040036;

Palomba A, Tanca A, Fraumene C, Abbondio M, Fancello F, Atzori AS, Uzzau S, Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb. Proteomes, 5(4):(2017) [pubmed]

Keyword List

curator keyword: Metaproteomics, Biological
submitter keyword: ruminant,Metaproteomics, mucosa, microbial community, sheep

curator keyword: Metaproteomics, Biological

submitter keyword: ruminant,Metaproteomics, mucosa, microbial community, sheep

Contact List

Sergio Uzzau
contact affiliation	Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy
contact email	Uzzau@portocontericerche.it
lab head
Antonio Palomba
contact affiliation	Porto Conte Ricerche
contact email	palomba@portocontericerche.it
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD008192
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD008192

PRIDE project URI

Repository Record List

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