PXD008165

PXD008165 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Effects of lipid diets on the metaproteome of the mice colon submucosa
Description	Eight mice colon (submucosa) samples were submitted for iTRAQ labeling, high pH reversed phase fractionation and LC-MS/MS analysis.
HostingRepository	PRIDE
AnnounceDate	2019-02-20
AnnouncementXML	Submission_2019-02-27_02:17:52.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD008165
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nijiati Abulizi
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Firmicutes MN01-01; NCBI TaxID: 1571871; scientific name: Bacteroidetes; NCBI TaxID: 976;
ModificationList	Methylthio; Deamidated; Oxidation; iTRAQ8plex
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-11-08 02:13:30	ID requested
1	2019-02-20 01:08:39	announced
⏵ 2	2019-02-27 02:17:53	announced	Updated publication reference for PubMed record(s): 30781503.

Publication List

Abulizi N, Quin C, Brown K, Chan YK, Gill SK, Gibson DL, Gut Mucosal Proteins and Bacteriome Are Shaped by the Saturation Index of Dietary Lipids. Nutrients, 11(2):(2019) [pubmed]

Abulizi N, Quin C, Brown K, Chan YK, Gill SK, Gibson DL, Gut Mucosal Proteins and Bacteriome Are Shaped by the Saturation Index of Dietary Lipids. Nutrients, 11(2):(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: lipid diet, metaproteome, mice, colon, submucosa, iTRAQ

curator keyword: Biological

submitter keyword: lipid diet, metaproteome, mice, colon, submucosa, iTRAQ

Contact List

Deanna Gibson
contact affiliation	The Centre for Microbiome and Inflammatory Research UBC Okanagan
contact email	deanna.gibson@ubc.ca
lab head
Nijiati Abulizi
contact affiliation	University of British Columbia Okanagan
contact email	nijiati.abulizi@ubc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD008165
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD008165

PRIDE project URI

Repository Record List

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