PXD008152

PXD008152 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Effects of lipid diets on the metaproteome of mouse colon mucosa
Description	Eight mice colon samples were submitted for iTRAQ labeling, high pH reversed phase fractionation and LC-MS/MS analysis.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:41:48.265.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD008152
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nijiati Abulizi
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Bacteroidetes; NCBI TaxID: 976; scientific name: Firmicutes bacterium; NCBI TaxID: 1879010;
ModificationList	Methylthio; Deamidated; Oxidation; iTRAQ8plex
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-11-07 03:41:03	ID requested
1	2019-02-20 01:16:17	announced
2	2019-02-27 02:18:22	announced	Updated publication reference for PubMed record(s): 30781503.
⏵ 3	2024-10-22 04:41:56	announced	2024-10-22: Updated project metadata.

Publication List

10.6019/PXD008152;
Abulizi N, Quin C, Brown K, Chan YK, Gill SK, Gibson DL, Gut Mucosal Proteins and Bacteriome Are Shaped by the Saturation Index of Dietary Lipids. Nutrients, 11(2):(2019) [pubmed]
10.3390/nu11020418;

10.6019/PXD008152;

Abulizi N, Quin C, Brown K, Chan YK, Gill SK, Gibson DL, Gut Mucosal Proteins and Bacteriome Are Shaped by the Saturation Index of Dietary Lipids. Nutrients, 11(2):(2019) [pubmed]

10.3390/nu11020418;

Keyword List

curator keyword: Biological
submitter keyword: fatty acids,lipid diet, metaproteome, mouse, iTRAQ, colon mucosa

curator keyword: Biological

submitter keyword: fatty acids,lipid diet, metaproteome, mouse, iTRAQ, colon mucosa

Contact List

Deanna Gibson
contact affiliation	IDEAS Laboratory:Center for Microbiome & Inflammatory Research UBC Okanagan
contact email	deanna.gibson@ubc.ca
lab head
Nijiati Abulizi
contact affiliation	University of British Columbia Okanagan
contact email	nijiati.abulizi@ubc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD008152
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD008152

PRIDE project URI

Repository Record List

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