PXD008046

PXD008046 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Qualitative proteomics analysis of the chicken amniotic fluid
Description	We designed a bottom-up proteomic approach combining two complementary strategies as GeLC-MS/MS (protein samples fractionated by SDS-PAGE are analyzed by nanoLC-MS/MS after in-gel digestion) and shotgun (protein samples are directly analyzed by nanoLC-MS/MS after in-solution digestion) to give an exhaustive view of the proteome of the chicken amniotic fluid at the 11th day of the development, before the substantial transfer of egg white (which completely changes the global protein profile).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:41:37.295.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD008046
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Lucie Combes-Soia
SpeciesList	scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031;
ModificationList	Oxidation; Acetyl; Carbamidomethyl
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-26 02:09:47	ID requested
1	2018-02-21 08:01:05	announced
⏵ 2	2024-10-22 04:41:45	announced	2024-10-22: Updated project metadata.

Publication List

Da Silva M, Dombre C, Brionne A, Monget P, Chess, é M, De Pauw M, Mills M, Combes-Soia L, Labas V, Guyot N, Nys Y, R, é, hault-Godbert S, The Unique Features of Proteins Depicting the Chicken Amniotic Fluid. Mol Cell Proteomics, 18(Suppl 1):S174-S190(2019) [pubmed]
10.6019/PXD008046;
10.1074/mcp.ra117.000459;

Da Silva M, Dombre C, Brionne A, Monget P, Chess, é M, De Pauw M, Mills M, Combes-Soia L, Labas V, Guyot N, Nys Y, R, é, hault-Godbert S, The Unique Features of Proteins Depicting the Chicken Amniotic Fluid. Mol Cell Proteomics, 18(Suppl 1):S174-S190(2019) [pubmed]

10.6019/PXD008046;

10.1074/mcp.ra117.000459;

Keyword List

curator keyword: Biological
submitter keyword: Chicken, Amniotic fluid,Proteomics

curator keyword: Biological

submitter keyword: Chicken, Amniotic fluid,Proteomics

Contact List

Rehault Godbert
contact affiliation	Equipe Defense de l'Oeuf, Valorisation, Evolution Unite de Recherches Avicoles Institut National de la Recherche Agronomique 37380 Nouzilly, Centre-Val de Loire, France
contact email	sophie.rehault-godbert@inra.fr
lab head
Lucie Combes-Soia
contact affiliation	INRA
contact email	lucie.combes-soia@inra.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD008046
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD008046

PRIDE project URI

Repository Record List

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