PXD007980

PXD007980 is an original dataset announced via ProteomeXchange.

Title	Echis carinatus carinatus (India) venom proteomics
Description	In order to study the proteome of Echis carinatus carinatus venom of Indian origin, crude venom was fractionated on a Shodex KW-803 gel filtration column coupled to Dionex Ultimate 3000 UHPLC system. The resulting peaks were pooled and subjected to in-solution trypsin digestion and subsequent tandem mass spectrometry analysis. The raw data were then analysed using PEAKS 8.5 software to finally decipher the complex venom proteome.
HostingRepository	PRIDE
AnnounceDate	2017-12-15
AnnouncementXML	Submission_2017-12-15_00:48:51.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Aparup Patra
SpeciesList	scientific name: Echis carinatus; NCBI TaxID: 40353;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-17 05:50:23	ID requested
⏵ 1	2017-12-15 00:48:53	announced

Patra A, Kalita B, Chanda A, Mukherjee AK, Proteomics and antivenomics of Echis carinatus carinatus venom: Correlation with pharmacological properties and pathophysiology of envenomation. Sci Rep, 7(1):17119(2017) [pubmed]

curator keyword: Biological

submitter keyword: snake venom, LC-MS/MS, shotgun proteomics

Dr. Ashis Kumar Mukherjee
contact affiliation	Professor, Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur, India
contact email	ashmukh@yahoo.co.uk
lab head
Aparup Patra
contact affiliation	Research Scholar
contact email	aparup@tezu.ernet.in
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD007980

PRIDE project URI

• PRIDE
  1. PXD007980
     1. Label: PRIDE project
     2. Name: Echis carinatus carinatus (India) venom proteomics