PXD007893

PXD007893 is an original dataset announced via ProteomeXchange.

Title	Cell wall proteome of sugarcane young and mature leaves and stems
Description	By characterizing the cell wall proteomes of different sugarcane organs (leaves and stems) at two developmental stages (young vs mature/apical vs basal), it was possible to address unique characteristics in each of them. Four-month-old leaves showed a higher proportion of oxido-reductases and proteins related to lipid metabolism (LM), besides a lower proportion of proteins acting on polysaccharides, in comparison to four-month-old internodes. It was possible to note that sugarcane leaves and young stems have the highest LM rate than all species, which was assumed to be linked to cuticle formation. The data generated enriched the number of cell wall proteins (CWPs) identified in sugarcane, reaching 277. To our knowledge, sugarcane has now the second higher coverage of monocot CWP in plants
HostingRepository	PRIDE
AnnounceDate	2018-01-05
AnnouncementXML	Submission_2018-01-05_02:00:05.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Thais Cataldi
SpeciesList	scientific name: Saccharum spp. complex hybrid; NCBI TaxID: 707683;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-03 01:29:06	ID requested
⏵ 1	2018-01-05 02:00:07	announced

Fonseca JG, Calderan-Rodrigues MJ, de Moraes FE, Cataldi TR, Jamet E, Labate CA, Cell Wall Proteome of Sugarcane Young and Mature Leaves and Stems. Proteomics, 18(2):(2018) [pubmed]

curator keyword: Biological

submitter keyword: cell wall protein/leaf/mass spectrometry/proteomics/shotgun analysis/ stem/sugarcane

Carlos Alberto Labate
contact affiliation	ESALQ
contact email	calabate@usp.br
lab head
Thais Cataldi
contact affiliation	ESALQ USP
contact email	thais.cataldi@usp.br
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD007893

PRIDE project URI

• PRIDE
  1. PXD007893
     1. Label: PRIDE project
     2. Name: Cell wall proteome of sugarcane young and mature leaves and stems