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PXD007817

PXD007817 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomics of Nitrospirae
DescriptionWe present the draft genome of Nitrospirae bacterium Nbg-4 as a representative of this clade and couple this to in situ protein expression under sulfate-enriched and sulfate-depleted conditions in rice paddy soil. The proteins were extracted from the soil and analysed via LC-MS/MS measurements.
HostingRepositoryPRIDE
AnnounceDate2018-01-08
AnnouncementXMLSubmission_2018-01-08_05:42:29.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterJana Seifert
SpeciesList scientific name: Bacteria; NCBI TaxID: 2;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-09-22 00:56:22ID requested
12018-01-08 05:42:30announced
Publication List
Zecchin S, Mueller RC, Seifert J, Stingl U, Anantharaman K, von Bergen M, Cavalca L, Pester M, Rice Paddy Nitrospirae Carry and Express Genes Related to Sulfate Respiration: Proposal of the New Genus "Candidatus Sulfobium". Appl Environ Microbiol, 84(5):(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: soil, bacteria, Nitrospirae
Contact List
Jana Seifert
contact affiliationUniversity of Hohenheim, Institute of Animal Science, Stuttgart, Germany
contact emailjseifert@uni-hohenheim.de
lab head
Jana Seifert
contact affiliationUniversity of Hohenheim
contact emailjseifert@uni-hohenheim.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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