PXD007606

PXD007606 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	SWATH-MS in TCTP-deficient MPNST cells
Description	EF1A2-binding proteins in TCTP-deficient MPNST cells were identified by immuno-precipitation using anti-FLAG antibody and SWATH. To verify whether the change of the amount of EF1A2-binding proteins caused the cellular expression change, the proteins expressed in sNF96.2 MPNST cells treated with TCTP-siRNA were profiled by SWATH-MS.
HostingRepository	jPOST
AnnounceDate	2018-11-05
AnnouncementXML	Submission_2022-09-18_03:51:16.947.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Daiki Kobayashi
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
Instrument	TripleTOF 6600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-30 19:48:34	ID requested
1	2018-11-04 23:15:32	announced
2	2021-02-04 17:07:51	announced	2021-02-04: Updated FTP location.
⏵ 3	2022-09-18 03:51:17	announced	2022-09-18: Updated FTP location.

Publication List

Kobayashi D, Tokuda T, Sato K, Okanishi H, Nagayama M, Hirayama-Kurogi M, Ohtsuki S, Araki N, Identification of a Specific Translational Machinery via TCTP-EF1A2 Interaction Regulating NF1-associated Tumor Growth by Affinity Purification and Data-independent Mass Spectrometry Acquisition (AP-DIA). Mol Cell Proteomics, 18(2):245-262(2019) [pubmed]

Kobayashi D, Tokuda T, Sato K, Okanishi H, Nagayama M, Hirayama-Kurogi M, Ohtsuki S, Araki N, Identification of a Specific Translational Machinery via TCTP-EF1A2 Interaction Regulating NF1-associated Tumor Growth by Affinity Purification and Data-independent Mass Spectrometry Acquisition (AP-DIA). Mol Cell Proteomics, 18(2):245-262(2019) [pubmed]

Keyword List

submitter keyword: EF1A2, TCTP, SWATH

submitter keyword: EF1A2, TCTP, SWATH

Contact List

Norie Araki
lab head
Daiki Kobayashi
contact affiliation	Kumamoto University
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000311/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000311/