PXD007599 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Pitcher fluid protein profiling from Nepenthes spp. |
Description | Pitcher fluids from 3 species of Nepenthes, namely N. ampullaria, N. rafflesiana and their hybrid H. x hookeriana were collected within 24h of opening, filtered, concentrated, processed and trypsin-digested for mass spectrometry analysis using Thermo Easy-nLC Orbitrap Fusion Tribid MS. Analysis was performed in 2 biological replicates of pools of 9 pitchers for each species and analysed in 3 technical replicates each. |
HostingRepository | PRIDE |
AnnounceDate | 2020-08-28 |
AnnouncementXML | Submission_2020-08-28_07:28:10.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Hoe-Han Goh |
SpeciesList | scientific name: Nepenthes x hookeriana; NCBI TaxID: 1610511; scientific name: Nepenthes rafflesiana; NCBI TaxID: 150990; scientific name: Nepenthes ampullaria; NCBI TaxID: 150949; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-08-30 06:45:39 | ID requested | |
1 | 2018-11-27 03:11:17 | announced | |
⏵ 2 | 2020-08-28 07:28:10 | announced | 2020-08-28: Updated publication reference for PubMed record(s): 28529881. |
Publication List
Zulkapli MM, Rosli MAF, Salleh FIM, Mohd Noor N, Aizat WM, Goh HH, for hybridisation study in pitcher plants. Genom Data, 12():130-131(2017) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: carnivorous, enzymes, LC-MS, Nepenthes, orbitrap, pithcer fluid |
Contact List
HOE-HAN GOH |
contact affiliation | Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, Bangi 43600 Selangor Darul Ehsan, MALAYSIA |
contact email | gohhh@ukm.edu.my |
lab head | |
Hoe-Han Goh |
contact affiliation | Universiti Kebangsaan Malaysia |
contact email | gohhh@ukm.edu.my |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD007599 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD007599
- Label: PRIDE project
- Name: Pitcher fluid protein profiling from Nepenthes spp.