PXD007516

PXD007516 is an original dataset announced via ProteomeXchange.

Title	Proteomics analysis of milk from cows with Staphylococcus aureus subclinical mastitis
Description	Liquid chromatography-mass spectrometry (LC/MS) based label free quantitative proteomics analysis was applied for identification of differentially expressed proteins among the whey samples isolated from, 1) milk from cows with no history of mastitis, negative for S. aureus and somatic cell count (SCC) >2×105 cells\ml and 2) milk samples from sub-clinical mastitis., i.e., positive for S. aureus and SCC >2×105 cells\ml.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_03:59:23.459.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jayaseelan Murugaiyan
SpeciesList	scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; scientific name: Bos taurus; NCBI TaxID: NCBITaxon:9913;
ModificationList	phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-18 02:21:28	ID requested
1	2018-01-02 05:58:54	announced
⏵ 2	2024-10-22 03:59:24	announced	2024-10-22: Updated project metadata.

10.3390/ijms19010078;

Abdelmegid S, Murugaiyan J, Abo-Ismail M, Caswell JL, Kelton D, Kirby GM, Identification of Host Defense-Related Proteins Using Label-Free Quantitative Proteomic Analysis of Milk Whey from Cows with Staphylococcus aureus Subclinical Mastitis. Int J Mol Sci, 19(1):(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: label free quantitative analysis, bovine mastitis, Perseus software, Staphylococcus aureus,Cow milk proteomics, Whey, MaxQuant-Andromeda, LTQ Orbitrap Velos mass spectrometer, Maxquant software

Jayaseelan Murugaiyan
contact affiliation	Institute of Animal Hygiene and Environmental Health, Centre for Infectious Medicine, Freie Universität Berlin, Robert-von-Ostertag-Str. 7-13, 14163 Berlin, Germany.
contact email	Jayaseelan.murugaiyan@fu-berlin.de
lab head
Jayaseelan Murugaiyan
contact affiliation	Freie Universitaet-Berlin,Institute of Animal Hygiene and Environmental Health
contact email	jayaseelan.murugaiyan@fu-berlin.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD007516

PRIDE project URI

• PRIDE
  1. PXD007516
     1. Label: PRIDE project
     2. Name: Proteomics analysis of milk from cows with Staphylococcus aureus subclinical mastitis