PXD007217

PXD007217 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Plasma proteomic profiling of small size HER2-positive breast cancer
Description	Lymph node status is a crucial predictor for the overall survival of invasive breast cancer. However, lymph node involvement is only detected in about half of HER2 positive patients. Currently, there are no biomarkers available for distinguishing small size HER2-positive breast cancers with different lymph node statuses. Thus, in the present study, we applied label-free quantitative proteomic strategy to construct plasma proteomic profiles of ten patients with small size HER2-positive breast cancers (5 patients with lymph node metastasis versus 5 patients with lymph node metastasis).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:13:50.944.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tao Zhou
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-08 07:56:55	ID requested
1	2018-02-08 02:02:28	announced
⏵ 2	2024-10-22 04:13:53	announced	2024-10-22: Updated project metadata.

Publication List

Chen L, Zhao W, He J, Li L, Meng D, Cai D, Yu J, Chen D, Wu Y, Zhou T, Label-Free Quantitative Proteomic Screening of Candidate Plasma Biomarkers for the Prognosis of Breast Cancer with Different Lymph Node Statuses. Proteomics Clin Appl, 12(3):e1700117(2018) [pubmed]
10.1002/prca.201700117;

Chen L, Zhao W, He J, Li L, Meng D, Cai D, Yu J, Chen D, Wu Y, Zhou T, Label-Free Quantitative Proteomic Screening of Candidate Plasma Biomarkers for the Prognosis of Breast Cancer with Different Lymph Node Statuses. Proteomics Clin Appl, 12(3):e1700117(2018) [pubmed]

10.1002/prca.201700117;

Keyword List

curator keyword: Biomedical
submitter keyword: shotgun proteomics,breast cancer, lymph node, label-free, plasma biomarker, prognosis

curator keyword: Biomedical

submitter keyword: shotgun proteomics,breast cancer, lymph node, label-free, plasma biomarker, prognosis

Contact List

Tao Zhou
contact affiliation	Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University
contact email	zhoutao@njmu.edu.cn
lab head
Tao Zhou
contact affiliation	Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University
contact email	zhoutao@njmu.edu.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD007217
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD007217

PRIDE project URI

Repository Record List

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