PXD007217 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Plasma proteomic profiling of small size HER2-positive breast cancer |
Description | Lymph node status is a crucial predictor for the overall survival of invasive breast cancer. However, lymph node involvement is only detected in about half of HER2 positive patients. Currently, there are no biomarkers available for distinguishing small size HER2-positive breast cancers with different lymph node statuses. Thus, in the present study, we applied label-free quantitative proteomic strategy to construct plasma proteomic profiles of ten patients with small size HER2-positive breast cancers (5 patients with lymph node metastasis versus 5 patients with lymph node metastasis). |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:13:50.944.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Tao Zhou |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-08-08 07:56:55 | ID requested | |
1 | 2018-02-08 02:02:28 | announced | |
⏵ 2 | 2024-10-22 04:13:53 | announced | 2024-10-22: Updated project metadata. |
Publication List
Chen L, Zhao W, He J, Li L, Meng D, Cai D, Yu J, Chen D, Wu Y, Zhou T, Label-Free Quantitative Proteomic Screening of Candidate Plasma Biomarkers for the Prognosis of Breast Cancer with Different Lymph Node Statuses. Proteomics Clin Appl, 12(3):e1700117(2018) [pubmed] |
10.1002/prca.201700117; |
Keyword List
curator keyword: Biomedical |
submitter keyword: shotgun proteomics,breast cancer, lymph node, label-free, plasma biomarker, prognosis |
Contact List
Tao Zhou |
contact affiliation | Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University |
contact email | zhoutao@njmu.edu.cn |
lab head | |
Tao Zhou |
contact affiliation | Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University |
contact email | zhoutao@njmu.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD007217 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD007217
- Label: PRIDE project
- Name: Plasma proteomic profiling of small size HER2-positive breast cancer