PXD007090

PXD007090 is an original dataset announced via ProteomeXchange.

Title	Proteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2)
Description	The impact of the conjugative plasmid pCAR1, which is involved in carbazole degradation, on the proteome, acetylome, and succinylome of host Pseudomonas putida KT2440 was investigated using a stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative analysis.
HostingRepository	PRIDE
AnnounceDate	2018-11-22
AnnouncementXML	Submission_2018-11-22_02:29:40.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Saori Kosono
SpeciesList	scientific name: Pseudomonas putida KT2440; NCBI TaxID: 160488;
ModificationList	residues isobaric at 113.084064 Da; Label:13C(6)+Acetyl; Succinyl; L-lysine residue; Oxidation; Label:13C(6); Acetyl; Carbamidomethyl
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-07-20 05:49:03	ID requested
⏵ 1	2018-11-22 02:29:41	announced

Vasileva D, Suzuki-Minakuchi C, Kosono S, Yoshida M, Okada K, Nojiri H, Proteome and acylome analyses of the functional interaction network between the carbazole-degradative plasmid pCAR1 and host Pseudomonas putida KT2440. Environ Microbiol Rep, 10(3):299-309(2018) [pubmed]

curator keyword: Biological

submitter keyword: Pseudomonas putida KT2440, pCAR1, SILAC, LC-MSMS

Saori Kosono
contact affiliation	Biotechnology Research Center, The University of Tokyo, Tokyo, Japan.
contact email	uskos@mail.ecc.u-tokyo.ac.jp
lab head
Saori Kosono
contact affiliation	UTokyo
contact email	uskos@mail.ecc.u-tokyo.ac.jp
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD007090

PRIDE project URI

• PRIDE
  1. PXD007090
     1. Label: PRIDE project
     2. Name: Proteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2)