PXD006992

PXD006992 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	PROTEOLYTIC SIGNATURES OF THROMBIN-DERIVED PEPTIDES by LC-MS/MS
Description	We hypothesized that the peptide profile could reflect the action of different proteases present in wounds. However, the complexity of such peptide systems, and lack of efficient analytic tools, until recently has hampered their clinical exploitation and use. In this project, we set out to define cleaved thrombin fragments generated by both endogenous and bacterial proteases.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:36:01.205.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sunil Adav
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	deamidated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-07-12 01:52:55	ID requested
1	2017-10-20 02:16:13	announced
⏵ 2	2024-10-22 04:36:07	announced	2024-10-22: Updated project metadata.

Publication List

Saravanan R, Adav SS, Choong YK, van der Plas MJA, Petrlova J, Kjellstr, ö, m S, Sze SK, Schmidtchen A, Proteolytic signatures define unique thrombin-derived peptides present in human wound fluid in vivo. Sci Rep, 7(1):13136(2017) [pubmed]
10.1038/s41598-017-13197-3;

Saravanan R, Adav SS, Choong YK, van der Plas MJA, Petrlova J, Kjellstr, ö, m S, Sze SK, Schmidtchen A, Proteolytic signatures define unique thrombin-derived peptides present in human wound fluid in vivo. Sci Rep, 7(1):13136(2017) [pubmed]

10.1038/s41598-017-13197-3;

Keyword List

curator keyword: Biological
submitter keyword: LC-MS/MS, antimicrobial peptide

curator keyword: Biological

submitter keyword: LC-MS/MS, antimicrobial peptide

Contact List

Prof. Sze S K
contact affiliation	Nanyang Technological University
contact email	SKSze@ntu.edu.sg
lab head
Sunil Adav
contact affiliation	Nanyang Technological University
contact email	ssadav@ntu.edu.sg
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/10/PXD006992
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/10/PXD006992

PRIDE project URI

Repository Record List

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