PXD006989

PXD006989 is an original dataset announced via ProteomeXchange.

Title	Leaf proteome of Glycine max in response to ethylene, ABA and combined ABA+ethylene treatments
Description	Phytohormones play a central role in plant physiology. Despite the significant understanding in the hormone signaling, a deep understanding of downstream targets is missing. Therefore, we used a shotgun proteomics approach to investigate the ethylene, ABA and ABA+ethylene signaling in soybean leaves. A protamine sulfate precipitation (PSP) method was used for the enrichment of the low-abundance proteins which were then identified by label-free quantitative proteomics. A total of 5171 unique proteins were identified, of which 1182 were differentially modulated in one or more treatments. Functional annotation of the differentially modulated proteins showed that these were mainly associated with the biosynthesis of secondary metabolites and fatty acid metabolism.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:38:57.387.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Katharina Kramer
SpeciesList	scientific name: Glycine max; NCBI TaxID: 3847;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-07-11 23:50:49	ID requested
1	2018-04-05 03:48:27	announced
⏵ 2	2024-10-22 04:39:05	announced	2024-10-22: Updated project metadata.

Gupta R, Min CW, Kramer K, Agrawal GK, Rakwal R, Park KH, Wang Y, Finkemeier I, Kim ST, A Multi-Omics Analysis of Glycine max Leaves Reveals Alteration in Flavonoid and Isoflavonoid Metabolism Upon Ethylene and Abscisic Acid Treatment. Proteomics, 18(7):e1700366(2018) [pubmed]

10.1002/pmic.201700366;

curator keyword: Biological

submitter keyword: Hidden proteome, Soybean,Phytohormones, low-abundance proteins

Dr. Sun Tae Kim
contact affiliation	Department of Plant Bioscience Pusan National University Miryang, 627-706 South Korea
contact email	stkim71@pusan.ac.kr
lab head
Katharina Kramer
contact affiliation	Max Planck Institute for Plant Breeding Research
contact email	kramer@mpipz.mpg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/04/PXD006989

PRIDE project URI

• PRIDE
  1. PXD006989
     1. Label: PRIDE project
     2. Name: Leaf proteome of Glycine max in response to ethylene, ABA and combined ABA+ethylene treatments