PXD006870

PXD006870 is an original dataset announced via ProteomeXchange.

Title	Transcriptome and proteome analysis reveals new insight into the proximal and distal responses of wheat to foliar infection by Xanthomonas translucens
Description	The molecular details of local plant response against Xanthomonas translucens infection is largely unknown. Moreover, there is no knowledge about effects of the pathogen on the root’s transcriptome and proteome. Therefore, we investigated the global gene and protein expression changes both in leaves and roots of wheat (Triticum aestivum) 24h post leaf infection of X. translucens. This simultaneous analysis allowed us to obtain insight into possible metabolic rearrangements in above- and belowground tissues and to identify common responses as well as specific alterations. At the site of infection, we observed the implication of various components of the recognition, signaling, and amplification mechanisms in plant response to the pathogen. Moreover, data indicate a massive down-regulation of photosynthesis and confirm the chloroplast as crucial signaling hub during pathogen attack. Notably, roots responded as well to foliar attack and their response significantly differed from that locally triggered in infected leaves. Data indicate that roots as a site of energy production and synthesis of various secondary metabolites may actively influence the composition and colonisation level of root-associated microbes. Finally, our results emphasize the accumulation of jasmonic acid, pipecolic acid and/or the downstream mediator of hydrogen peroxide as long distal signals from infected leaves to roots.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:39:21.258.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marco Chiapello
SpeciesList	scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565; scientific name: Xanthomonas translucens; NCBI TaxID: 343;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-07-05 07:44:25	ID requested
1	2017-09-04 00:31:28	announced
⏵ 2	2024-10-22 04:39:29	announced	2024-10-22: Updated project metadata.

Garcia-Seco D, Chiapello M, Bracale M, Pesce C, Bagnaresi P, Dubois E, Moulin L, Vannini C, Koebnik R, Transcriptome and proteome analysis reveal new insight into proximal and distal responses of wheat to foliar infection by Xanthomonas translucens. Sci Rep, 7(1):10157(2017) [pubmed]

10.1038/s41598-017-10568-8;

curator keyword: Biological

submitter keyword: Transcriptome proteome wheat Xanthomonas translucens infection systemic responses

Marcella Bracale
contact affiliation	Dept Biotecnology and life science, University of Insubria, Varese, Italy
contact email	marcella.bracale@uninsubria.it
lab head
Marco Chiapello
contact affiliation	Institute for Sustainable Plant Protection, National Research Council
contact email	chiapello.m@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/09/PXD006870

PRIDE project URI

• PRIDE
  1. PXD006870
     1. Label: PRIDE project
     2. Name: Transcriptome and proteome analysis reveals new insight into the proximal and distal responses of wheat to foliar infection by Xanthomonas translucens