PXD006805

PXD006805 is an original dataset announced via ProteomeXchange.

Title	In-depth protein profiling of cytology samples in urothelial carcinoma
Description	Urine cytologic examination is a widely used primary pathologic screening test in the diagnosis of bladder urothelial carcinoma (BLCA), however the low diagnostic accuracy remains challenging. We conducted high-throughput proteome on ten pairs of BLCA and benign urothelial lesion (BUL) to identify a supportive proteomic marker as an ancillary test in liquid based cytology (LBC).
HostingRepository	PRIDE
AnnounceDate	2018-07-04
AnnouncementXML	Submission_2018-07-04_05:54:41.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Dohyun Han
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-26 06:02:25	ID requested
⏵ 1	2018-07-04 05:54:43	announced

Lee H, Kim K, Woo J, Park J, Kim H, Lee KE, Kim H, Kim Y, Moon KC, Kim JY, Park IA, Shim BB, Moon JH, Han D, Ryu HS, Quantitative Proteomic Analysis Identifies AHNAK (Neuroblast Differentiation-associated Protein AHNAK) as a Novel Candidate Biomarker for Bladder Urothelial Carcinoma Diagnosis by Liquid-based Cytology. Mol Cell Proteomics, 17(9):1788-1802(2018) [pubmed]

curator keyword: Biomedical

submitter keyword: Human, Cytology, Liquid biopsy, quantitative proteomics, label free quantification

Dohyun Han
contact affiliation	Proteomics core facility, Biomedical research institute, Seoul national university hospital
contact email	hdh03@snu.ac.kr
lab head
Dohyun Han
contact affiliation	Biomedical Research Institute, Seoul National University Hospital
contact email	hdh03@snu.ac.kr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD006805

PRIDE project URI

• PRIDE
  1. PXD006805
     1. Label: PRIDE project
     2. Name: In-depth protein profiling of cytology samples in urothelial carcinoma