PXD006800

PXD006800 is an original dataset announced via ProteomeXchange.

Title	Establishment of plasmodesmata core proteome using label free semi-quantitative proteomic analysis.
Description	To establish the plasmodesmata core proteome, the identification and the relative amount of proteins in different cellular fractions, namely, the plasmodesmata, plasma membrane, total cell extract, microsomal and cell wall fractions, were determined using label-free quantification method. Four to six biological replicates for each fraction were used for quantification.
HostingRepository	PRIDE
AnnounceDate	2019-07-05
AnnouncementXML	Submission_2019-07-12_03:02:18.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Claverol Claverol
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	S-carboxamidoethyl-L-cysteine; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-26 01:42:37	ID requested
1	2019-07-05 05:59:01	announced
⏵ 2	2019-07-12 03:02:19	announced	Updated publication reference for PubMed record(s): 31286648.

Brault ML, Petit JD, Immel F, Nicolas WJ, Glavier M, Brocard L, Gaston A, Fouch, é M, Hawkins TJ, Crowet JM, Grison MS, Germain V, Rocher M, Kraner M, Alva V, Claverol S, Paterlini A, Helariutta Y, Deleu M, Lins L, Tilsner J, Bayer EM, Multiple C2 domains and transmembrane region proteins (MCTPs) tether membranes at plasmodesmata. EMBO Rep, 20(8):e47182(2019) [pubmed]

curator keyword: Biological

submitter keyword: Arabidopsis thaliana, Plasmodesmata, Proteomics, Label-free

Emmanuelle Bayer
contact affiliation	Laboratory of Membrane Biogenesis, University of Bordeaux, France
contact email	emmanuelle.bayer@u-bordeaux.fr
lab head
Claverol Claverol
contact affiliation	Plateforme Proteome
contact email	stephane.claverol@u-bordeaux.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD006800

PRIDE project URI

• PRIDE
  1. PXD006800
     1. Label: PRIDE project
     2. Name: Establishment of plasmodesmata core proteome using label free semi-quantitative proteomic analysis.