PXD006715

PXD006715 is an original dataset announced via ProteomeXchange.

Title	TRAIP regulates DNA double-strand break-induced ATM activation
Description	TRAIP is a functional E3 ubiquitin ligase with a RING finger domain at the N-terminal end. To find TRAIP partners and substrates we used a proximity-dependent biotinylation assay (Bio-ID) which can identify direct protein-protein interaction but also proteins building a complex without requiring direct interactions.
HostingRepository	PRIDE
AnnounceDate	2024-10-08
AnnouncementXML	Submission_2024-10-08_11:12:31.685.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD006715
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Manfredo Quadroni
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	GG; Carboxymethyl; Oxidation; Acetyl; Carbamidomethyl
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-14 05:42:31	ID requested
⏵ 1	2024-10-08 11:12:32	announced

10.6019/PXD006715;

10.1101/2021.10.11.462297;

submitter keyword: human cells, protein interactions,DNA damage, orbitrap, proximity labelling, BioID, tandem MS

Marcel Huber
contact affiliation	Department of Dermatology, CHUV, University Hospital Lausanne, Lausanne, 1011, Switzerland
contact email	marcel.huber@chuv.ch
lab head
Manfredo Quadroni
contact affiliation	University of Lausanne
contact email	manfredo.quadroni@unil.ch
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD006715

PRIDE project URI

• PRIDE
  1. PXD006715
     1. Label: PRIDE project
     2. Name: TRAIP regulates DNA double-strand break-induced ATM activation