PXD006698

PXD006698 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Tyrosine phosphatase interaction network
Description	Protein tyrosine phosphatases are crucial for various biological processes including cell metabolism, gene transcription, translation, cell-cycle regulation, protein stability, signal transduction, and apoptosis. To understand the functional network of each protein phosphatase in the cell, we performed a systematic proteomic analysis of 81 human protein phosphatases using tandem affinity purification coupled with mass spectrometry (TAP-MS).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:38:33.210.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Subbareddy Maddika
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-12 01:23:18	ID requested
1	2018-10-24 12:34:59	announced
⏵ 2	2024-10-22 04:38:41	announced	2024-10-22: Updated project metadata.

Publication List

10.1021/acs.jproteome.7b00065;
Kumar P, Munnangi P, Chowdary KR, Shah VJ, Shinde SR, Kolli NR, Halehalli RR, Nagarajaram HA, Maddika S, A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling. J Proteome Res, 16(8):2789-2801(2017) [pubmed]

10.1021/acs.jproteome.7b00065;

Kumar P, Munnangi P, Chowdary KR, Shah VJ, Shinde SR, Kolli NR, Halehalli RR, Nagarajaram HA, Maddika S, A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling. J Proteome Res, 16(8):2789-2801(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Human, LC-MSMS, PTP, HEK293T, TAP

curator keyword: Biological

submitter keyword: Human, LC-MSMS, PTP, HEK293T, TAP

Contact List

Dr. Maddika Subba Reddy
contact affiliation	Head Laboratory of Cell Death & Cell Survival (LCDCS) Centre for DNA Fingerprinting and Diagnostics (CDFD) Laboratory Block : Tuljaguda Complex, (Opp. M.J. Market) Nampally, Hyderabad, India
contact email	msreddy@cdfd.org.in
lab head
Subbareddy Maddika
contact affiliation	Group Head
contact email	msreddy@cdfd.org.in
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006698
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006698

PRIDE project URI

Repository Record List

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