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PXD006697

PXD006697 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSynthesizing Signaling Pathways from Temporal Phosphoproteomic Data
DescriptionA quantitative time series of EGFR signaling was acquired using mass spectrometry-based phosphoproteomics to develop an algorithm that identifies signaling pathway structures. The study used Flp-In 293 cells expressing EGFR that were stimulated with EGF.
HostingRepositoryPRIDE
AnnounceDate2018-09-18
AnnouncementXMLSubmission_2018-10-04_08:57:46.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAnthony Gitter
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListphosphorylated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-06-12 01:20:45ID requested
12018-09-18 07:19:05announced
22018-10-04 08:57:48announcedUpdated publication reference for PubMed record(s): 30257219.
Publication List
Köksal AS, Beck K, Cronin DR, McKenna A, Camp ND, Srivastava S, MacGilvray ME, Bodík R, Wolf-Yadlin A, Fraenkel E, Fisher J, Gitter A, Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data. Cell Rep, 24(13):3607-3618(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: HEK-293, phosphorylation, time series, EGFR, Temporal Pathway Synthesizer
Contact List
Anthony Gitter
contact affiliationUniversity of Wisconsin-Madison, Madison, WI, United States
contact emailgitter@biostat.wisc.edu
lab head
Anthony Gitter
contact affiliationUniversity of Wisconsin-Madison
contact emailgitter@biostat.wisc.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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