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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2017-07-17
  • AnnouncementXML: Submission_2017-07-17_04:15:24.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Aaron Ogden
  • Title: Nodule Zone Specific Proteome
  • Description: Root nodules of the medicago truncatula-sinorhizobium meliloti plant-bacterail symbiotic model system were hand sectioned followed by LCMS. Sections were made to separate different developmental zones along the nodules longitudinal axis.
  • SpeciesList: scientific name: Medicago truncatula (Barrel medic) (Medicago tribuloides); NCBI TaxID: 3880; scientific name: Sinorhizobium meliloti 1021; NCBI TaxID: 266834;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: Synapt MS

Dataset History

VersionDatetimeStatusChangeLog Entry
02017-06-09 01:59:48ID requested
12017-07-17 04:15:25announced

Publication List

  1. Ogden AJ, Gargouri M, Park J, Gang DR, Kahn ML, Integrated analysis of zone-specific protein and metabolite profiles within nitrogen-fixing Medicago truncatula-Sinorhizobium medicae nodules. PLoS One, 12(7):e0180894(2017) [pubmed]

Keyword List

  1. curator keyword: Biological
  2. submitter keyword: Sinorhizobium, meliloti, Medicago, truncatula, root, nodule, symbiotic, nitrogen, fixation, zone, proteomics

Contact List

    Michael Lee Kahn
    • contact affiliation: Institute of Biological Chemistry, Washington State University, Kahn Lab, United States of America
    • contact email: Kahn@wsu.edu
    • lab head:
    Aaron Ogden
    • contact affiliation: Washington State University
    • contact email: Aaron.ogden@wsu.edu
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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