PXD006683

PXD006683 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Nodule Zone Specific Proteome
Description	Root nodules of the medicago truncatula-sinorhizobium meliloti plant-bacterail symbiotic model system were hand sectioned followed by LCMS. Sections were made to separate different developmental zones along the nodules longitudinal axis.
HostingRepository	PRIDE
AnnounceDate	2017-07-17
AnnouncementXML	Submission_2017-07-17_04:15:24.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Aaron Ogden
SpeciesList	scientific name: Medicago truncatula (Barrel medic) (Medicago tribuloides); NCBI TaxID: 3880; scientific name: Sinorhizobium meliloti 1021; NCBI TaxID: 266834;
ModificationList	No PTMs are included in the dataset
Instrument	Synapt MS

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-09 01:59:48	ID requested
⏵ 1	2017-07-17 04:15:25	announced

Publication List

Ogden AJ, Gargouri M, Park J, Gang DR, Kahn ML, Integrated analysis of zone-specific protein and metabolite profiles within nitrogen-fixing Medicago truncatula-Sinorhizobium medicae nodules. PLoS One, 12(7):e0180894(2017) [pubmed]

Ogden AJ, Gargouri M, Park J, Gang DR, Kahn ML, Integrated analysis of zone-specific protein and metabolite profiles within nitrogen-fixing Medicago truncatula-Sinorhizobium medicae nodules. PLoS One, 12(7):e0180894(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Sinorhizobium, meliloti, Medicago, truncatula, root, nodule, symbiotic, nitrogen, fixation, zone, proteomics

curator keyword: Biological

submitter keyword: Sinorhizobium, meliloti, Medicago, truncatula, root, nodule, symbiotic, nitrogen, fixation, zone, proteomics

Contact List

Michael Lee Kahn
contact affiliation	Institute of Biological Chemistry, Washington State University, Kahn Lab, United States of America
contact email	Kahn@wsu.edu
lab head
Aaron Ogden
contact affiliation	Washington State University
contact email	Aaron.ogden@wsu.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD006683
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD006683

PRIDE project URI

Repository Record List

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