PXD006644

PXD006644 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	SUMO proteomics in Caenorhabditis elegans
Description	Comprehensive list of SUMO targets from the nematode Caenorhabditis elegans. SUMO conjugates isolated from transgenic worms carrying 8His and GFP tagged SUMO. The constructs rescues the lethal knock-out of a single SUMO gene, smo-1. SUMO conjugates where isolated from heat shock, arsenite exposure, and UV treated SUMO-GFP worms as well as from control non treated animals. In parallel identical purification procedure was performed with non-transgenic worms and proteins identified with this control where excluded.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:42:52.930.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Krzysztof Drabikowski
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: 6239;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-01 04:57:18	ID requested
1	2018-01-25 04:38:16	announced
⏵ 2	2024-10-22 04:42:58	announced	2024-10-22: Updated project metadata.

Publication List

Drabikowski K, Ferralli J, Kistowski M, Oledzki J, Dadlez M, Chiquet-Ehrismann R, Comprehensive list of SUMO targets in Caenorhabditis elegans and its implication for evolutionary conservation of SUMO signaling. Sci Rep, 8(1):1139(2018) [pubmed]
10.1038/s41598-018-19424-9;

Drabikowski K, Ferralli J, Kistowski M, Oledzki J, Dadlez M, Chiquet-Ehrismann R, Comprehensive list of SUMO targets in Caenorhabditis elegans and its implication for evolutionary conservation of SUMO signaling. Sci Rep, 8(1):1139(2018) [pubmed]

10.1038/s41598-018-19424-9;

Keyword List

curator keyword: Biological
submitter keyword: SUMO, C. elegans

curator keyword: Biological

submitter keyword: SUMO, C. elegans

Contact List

Michał Dadlez
contact affiliation	Institute of Biochemistry and Biophysics Polish Academy of Sciences Pawinskiego 5a 02-106 Warszawa, Poland
contact email	michald@ibb.waw.pl
lab head
Krzysztof Drabikowski
contact affiliation	Institute of Biochemistry and Biophysics, Polish Academy of Sciences. Pawinskiego 5a 02-106 Warszawa Poland
contact email	drabikowski@ibb.waw.pl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD006644
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD006644

PRIDE project URI

Repository Record List

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