PXD006614

PXD006614 is an original dataset announced via ProteomeXchange.

Title	Missing proteins identified from the haploid cell lines: HAP1 and KBM-7
Description	Chromosome-centric Human Proteomic Project (C-HPP) aims at identifying and characterizing protein products encoded from all protein-coding genes of human chromosomes. As evident in the recent nature papers, it is possible that those missing proteins may be low abundant in many cell types or expressed only in a few cell types. In order to identify missing proteins, we focused on extensively unexplored cell lines(HAP1, KBM-7).
HostingRepository	PRIDE
AnnounceDate	2018-10-01
AnnouncementXML	Submission_2018-10-01_09:06:18.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jongkeon Song
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-29 04:51:12	ID requested
⏵ 1	2018-10-01 09:06:19	announced

Lee SE, Song J, B, ö, sl K, M, ü, ller AC, Vitko D, Bennett KL, Superti-Furga G, Pandey A, Kandasamy RK, Kim MS, Proteogenomic Analysis to Identify Missing Proteins from Haploid Cell Lines. Proteomics, 18(8):e1700386(2018) [pubmed]

ProteomeXchange project tag: Chromosome-centric Human Proteome Project (C-HPP), Human Proteome Project

curator keyword: Biomedical

submitter keyword: Haploid cell line, HAP1, KBM-7, LC-MSMS,Missing proteins

Min-Sik Kim
contact affiliation	Department of Applied Chemistry, Kyung Hee University, Yongin, Korea
contact email	ms_kim@khu.ac.kr
lab head
Jongkeon Song
contact affiliation	Kyung Hee University
contact email	sipo9498@khu.ac.kr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006614

PRIDE project URI

• PRIDE
  1. PXD006614
     1. Label: PRIDE project
     2. Name: Missing proteins identified from the haploid cell lines: HAP1 and KBM-7