PXD006536

PXD006536 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteome, Metabolite, and Cell Wall Profiling of an Elongating Rice Stem Internode
Description	LC-MS/MS proteomics data was generated as part of an Isobaric tag (iTRAQ 4-plex) labeling experiment conducted on Oryza sativa ssp. japonica cv. Kitaake.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:38:17.322.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD006536
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationList	iTRAQ4plex; Oxidation; Carbamidomethyl
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-17 03:32:06	ID requested
1	2017-08-04 03:20:29	announced
⏵ 2	2024-10-22 04:38:18	announced	2024-10-22: Updated project metadata.

Publication List

10.3389/fpls.2017.01134;
10.6019/PXD006536;
Lin F, Williams BJ, Thangella PAV, Ladak A, Schepmoes AA, Olivos HJ, Zhao K, Callister SJ, Bartley LE, Proteomics Coupled with Metabolite and Cell Wall Profiling Reveal Metabolic Processes of a Developing Rice Stem Internode. Front Plant Sci, 8():1134(2017) [pubmed]

10.3389/fpls.2017.01134;

10.6019/PXD006536;

Lin F, Williams BJ, Thangella PAV, Ladak A, Schepmoes AA, Olivos HJ, Zhao K, Callister SJ, Bartley LE, Proteomics Coupled with Metabolite and Cell Wall Profiling Reveal Metabolic Processes of a Developing Rice Stem Internode. Front Plant Sci, 8():1134(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: proteomics, metabolomics,internode, cell wall

curator keyword: Biological

submitter keyword: proteomics, metabolomics,internode, cell wall

Contact List

Laura E. Bartley
contact affiliation	University of Oklahoma
contact email	lbartley@ou.edu
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/08/PXD006536
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/08/PXD006536

PRIDE project URI

Repository Record List

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