PXD006521

PXD006521 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Massey Dolin Hepatology 2017 Hepatic matrisome response to injury
Description	Proteomic analysis of mouse livers from animals maintained on 6-week diet of alcohol with a 10mg/kg ip LPS or saline (control) injection 24hr prior to sacrifice. Livers were extracted using a sequential extraction approach similiar to the method of de Castro Bras LE, Ramirez TA, DeLeon-Pennell KY, Chiao YA, Ma Y, Dai Q, et al. Texas 3-step decellularization protocol: looking at the cardiac extracellular matrix. J Proteomics 2013;86:43-52. Data collection and analysis are described in Massey VL, Dolin CE, Poole LG, Hudson SV, Siow DL, Brock GN, Merchant ML, Wilkey DW, Arteel GE. The hepatic "matrisome" responds dynamically to injury: Characterization of transitional changes to the extracellular matrix in mice. Hepatology. 2017 Mar;65(3):969-982. doi: 10.1002/hep.28918. Epub 2016 Dec 30. PubMed PMID: 28035785; PubMed Central PMCID: PMC5319876.
HostingRepository	MassIVE
AnnounceDate	2017-05-15
AnnouncementXML	Submission_2017-05-15_09:53:08.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Michael Merchant
SpeciesList	scientific name: Mus ; NCBI TaxID: 10088;
ModificationList	L-methionine sulfoxide; S-carboxamidomethyl-L-cysteine; deglycosylated asparagine
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-15 09:36:42	ID requested
⏵ 1	2017-05-15 09:53:09	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Liver matrisome ethanol lipopolysaccharide carbontetrachloride

submitter keyword: Liver matrisome ethanol lipopolysaccharide carbontetrachloride

Contact List

Gavin Arteel, PhD
contact affiliation	University of Louisville
contact email	gearte01@exchange.louisville.edu
lab head
Michael Merchant
contact affiliation	University of Louisville
contact email	mlmerc02@louisville.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081084

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081084