PXD006472

PXD006472 is an original dataset announced via ProteomeXchange.

Title	Bering Strait surface water and Chukchi Sea bottom water microbiome metaproteomics
Description	Analysis of bacterial fraction collected on GF/F filters post pre-filtration on 1um filter. 15L were filtered from Bering Strait (BSt) surface water and Chukchi Sea (station 2) bottom waters.
HostingRepository	PRIDE
AnnounceDate	2017-05-19
AnnouncementXML	Submission_2017-05-19_01:53:49.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Brook Nunn
SpeciesList	scientific name: marine metagenome; NCBI TaxID: 408172;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-09 23:39:40	ID requested
⏵ 1	2017-05-19 01:53:50	announced

May DH, Timmins-Schiffman E, Mikan MP, Harvey HR, Borenstein E, Nunn BL, Noble WS, An Alignment-Free "Metapeptide" Strategy for Metaproteomic Characterization of Microbiome Samples Using Shotgun Metagenomic Sequencing. J Proteome Res, 15(8):2697-705(2016) [pubmed]

curator keyword: Metaproteomics

submitter keyword: Bering Strait surface water and Chukchi Sea bottom water microbiome metaproteomics

Brook L. Nuun
contact affiliation	University of Washington, Department of Genome Sciences
contact email	brookh@uw.edu
lab head
Brook Nunn
contact affiliation	University of Washington
contact email	brookh@uw.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/05/PXD006472

PRIDE project URI

• PRIDE
  1. PXD006472
     1. Label: PRIDE project
     2. Name: Bering Strait surface water and Chukchi Sea bottom water microbiome metaproteomics