PXD006445

PXD006445 is an original dataset announced via ProteomeXchange.

Title	“Intelligent versus Blind response”- Unveiling a Hypercellulolytic Fungus Strategy for Efficient Polymeric Carbon Deconstruction via Multiplexed Quantitative Proteomics
Description	Fungi are ubiquitous and are often confronted with the need to secure utilisable carbon from their external growth milieu through the use of extracellular proteins to scavenge for carbon from a vast array of complex polymeric carbon sources. This attribute is conserved across evolution in fungi. To understand how filamentous fungi extracellular proteins are modulated in response to the presence polymeric carbons in the environment, we have typed the array of the main extracellular proteins involved and their dynamics using a known hypercellulolytic fungus – Penicillium funiculosum (NCIM 1228), through multiplexed quantitative proteomics
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:37:10.341.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Funso Ogunmolu
SpeciesList	scientific name: Talaromyces funiculosus NCIM1228; NCBI TaxID: 1414448;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-03 08:07:22	ID requested
1	2018-04-12 02:15:26	announced
⏵ 2	2024-10-22 04:37:18	announced	2024-10-22: Updated project metadata.

10.1016/j.jprot.2018.03.025;

Ogunmolu FE, Kaur I, Pasari N, Gupta M, Yazdani SS, Quantitative multiplexed profiling of Penicillium funiculosum secretome grown on polymeric cellulase inducers and glucose. J Proteomics, 179():150-160(2018) [pubmed]

curator keyword: Biological

submitter keyword: lignocellulose, secretomes,Hypercellulolytic fungus, quantitative proteomics, carbohydrate active enzymes

Syed Shams Yazdani
contact affiliation	International Centre for Genetic Engineering and Biotechnology Aruna Asaf Ali Marg 110 067 New Delhi, India
contact email	shams@icgeb.res.in
lab head
Funso Ogunmolu
contact affiliation	International Centre for Genetic Engineering and Biotechnology, New Delhi - India
contact email	funso@icgeb.res.in
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/04/PXD006445

PRIDE project URI

• PRIDE
  1. PXD006445
     1. Label: PRIDE project
     2. Name: “Intelligent versus Blind response”- Unveiling a Hypercellulolytic Fungus Strategy for Efficient Polymeric Carbon Deconstruction via Multiplexed Quantitative Proteomics